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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00993 ATGCAATTCCTCCAGTTTCATGGAACCTTGATGGGGCCCATCTTTATAGATGAAATAGACATGGATATTTGCGGGGATTTCTTCGACCACATAGATGATTTACTTGATTTTCCAAGTGAAGACGTCAAAGGAGGAACTGTCAGAGGAGATTGCAATGGCTTCCAAGGCAGTTGGCTTGCCCCACCAGACAGTTTGGCGGGTCTATTTCTGTTTTCTCTAGAAACAACACCTATAGCAGTTCAGAACTACCCACAGAGCTTCCTGTTTCAGTTCTGCGAGAGAGCACAAGCTCTAATACATGGAGATCTCCATACTAGTTCTGTCATGGTAACTCGTGATTCCACTCAGGTTATAGACCCTGAATTTTCGGTTTATGGACCAATGGGATACGATGTAGGAGCCTTTCTAGGAAACTTGATTTTGGATTTCTTTGCTCAAGATGGACATGCTGATCCAGGGAACGACCAAAATGAATATGACATGGCAGTAGCTATCTTCCCTCGAGATGCAACCAACTACGAGTTTAACAAAGAGATGGGAAGCTAA 546 43.59 MQFLQFHGTLMGPIFIDEIDMDICGDFFDHIDDLLDFPSEDVKGGTVRGDCNGFQGSWLAPPDSLAGLFLFSLETTPIAVQNYPQSFLFQFCERAQALIHGDLHTSSVMVTRDSTQVIDPEFSVYGPMGYDVGAFLGNLILDFFAQDGHADPGNDQNEYDMAVAIFPRDATNYEFNKEMGS 181
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00993 181 PANTHER METHYLTHIORIBOSE KINASE 87 162 - -
Eupl14g00993 181 Gene3D - 80 179 - -
Eupl14g00993 181 Pfam Phosphotransferase enzyme family 93 138 IPR002575 -
Eupl14g00993 181 SUPERFAMILY Protein kinase-like (PK-like) 90 149 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00993 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:15409159 Eupl6g01082 Eupl-Chr6:17716800 dispersed
Eupl Eupl-Chr14:15409159 Eupl1g01505 Eupl-Chr1:35949785 transposed