Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01000 | ATGAAAGGAGGAGAAATGTCTAACTACATTACCCAAGTTGCCATCTTCATTCTCTATATTGACGAGTGTGGCAACCCAAACAACATACCCTGCCATGCGGATGCGATTTGCGAAAATAACCCTGGAGATTTTAAATGCTCTTGTAAAGCTGGCTACCATGGTGAGGGTAAAATAGATCAAGGAACTGGCTGCACACGTGATACTAAATCATTTCCAGTGATACACCTCGTTCTAGCAGCAGTCCACACCTCCATCATCATCAAGACCCAGCAGCCACGTCTTCATCAACGCTCCATCCCTCATCCATCACGTCCTCACCAAACCATTGCCGCCCCTACCAAAACAACTCCACCGCCTGCTGCTGCCTTCTTGCACCACCTATATCGCCCATCTCCATCATCCCAAATCGTTGCATACAGCAACATCAAGAAGGTAGGGTCCTACTGGATGTTGAAGGTGGTTACTGGCCGAACTAATGAGAAGGAGTGCAGGCGGTGTGGGAAGATAAGGTTTTACAGTCCAATTAATGGACTGATGCGTGGAGGGGAAGTGCGAAACGAGGAAGATGGAGCGGTAGAAGAGGCAACAACCAATGGAGTTCTCCAGCCAAACTATTACCTTTGTGGTTCAGCCAAGAGGGCATTGAGGGGGGGAATGATGTGCATGTTGATGGTGTGCATTGAGGGCAACGGTGGTTCCCAAGAGATTTTGCAAGTGGTGAAGACACCCGTTCTATATATCCAAGAAGAGAGACGCTGGTCATGTCCACGAGAGGGTTGA | 780 | 48.59 | MKGGEMSNYITQVAIFILYIDECGNPNNIPCHADAICENNPGDFKCSCKAGYHGEGKIDQGTGCTRDTKSFPVIHLVLAAVHTSIIIKTQQPRLHQRSIPHPSRPHQTIAAPTKTTPPPAAAFLHHLYRPSPSSQIVAYSNIKKVGSYWMLKVVTGRTNEKECRRCGKIRFYSPINGLMRGGEVRNEEDGAVEEATTNGVLQPNYYLCGSAKRALRGGMMCMLMVCIEGNGGSQEILQVVKTPVLYIQEERRWSCPREG | 259 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01000 | 259 | ProSiteProfiles | EGF-like domain profile. | 19 | 55 | IPR000742 | - | |
| Eupl14g01000 | 259 | Pfam | EGF domain | 27 | 57 | IPR024731 | - | |
| Eupl14g01000 | 259 | MobiDBLite | consensus disorder prediction | 91 | 112 | - | - | |
| Eupl14g01000 | 259 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 37 | 48 | IPR000152 | - | |
| Eupl14g01000 | 259 | FunFam | Fibrillin 2 | 17 | 59 | - | - | |
| Eupl14g01000 | 259 | CDD | EGF-CA | 20 | 54 | - | - | |
| Eupl14g01000 | 259 | SMART | egfca-6 | 20 | 65 | IPR001881 | GO:0005509(InterPro) | |
| Eupl14g01000 | 259 | SUPERFAMILY | EGF-Laminin | 20 | 55 | - | - | |
| Eupl14g01000 | 259 | Gene3D | Laminin | 10 | 66 | - | - | |
| Eupl14g01000 | 259 | SMART | egf-5 | 22 | 65 | IPR000742 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01000 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:15622167 | Eupl14g00004 | Eupl-Chr14:79598 | dispersed | |
| Eupl | Eupl-Chr14:15600511 | Eupl14g01000 | Eupl-Chr14:15622167 | proximal |