AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01017 ATGACTGTCCTCCGAAGGATCTACTCCAGGTTGCCACAAGTTTTGGGATTGACAAGGAAGCCCTTCAATTCATGGAAATTTCCCGGCGAGCTCCTCAACTCCTTCTCTTCCACCACCACCACTACCACCGCCACCCATGGTGTTCACGTTTTTCACTGCCCCGACGTTGTTGGGATTGTTGCGAAGCTTTCGGAATGCATCGCTTCGAGAGGGGGAAACATACTGAGTGTCGATGTCTTCGTCCCCGAAAACAAGCAGGTCTTCTACTCCAGGAGTGAGTTTGTCTTTGACCCCGTGAGATGGCCACGAGTGGAGATGGATGAAGACTTCCTGAAACTGTCAAAGTTGTTCAATGCAATGAAATCCGTTGTACGGGTGCCCAATCTTGACCCCAAATATAAGATTGCAGTTCTTGCTTCAAAGCAGGACCATTGTTTGGTGGACTTGTTACATGGATGGCAGGATGGGAGACTCCCTGTCGATATAAATTGTGTAATAAGTAATCACGACAGAGGTCCAAATACCCATGTAATTCGGTTTCTCGAAAGGCATGGCATTCCATACCATTATTTGCGCATGACTAAGGGGAATAAAAGAGATGGAGAGATCTTGGATTTGGTTCAAAATACTGATTTTCTAGTTCTCGCTAGATATATGCAGATATTGTCAGGGAAATTCTTGGAGGGCTATGGGAAAGATATTATTAACATTCACCATGGCCTTTTGCCATCGTTTAAGGGGGGGAATCCTTCTAAACAGGCATTTGATGCTGGTGTGAAAATGATTGGTGCAACAAGTCACTTTGTAACAGAAGAACTTGACGCGGGGCCAATCATCGAACAGATGGTTGAGAGAGTTTCCCACCGAGATAACTTACGGAGTTTCGTGCAGAAATCGGAGAACCTCGAAAAACAATGTCTGGCAAAGGCAATAAAATCATACTGTGAGCTCCGAGTGCTACCGTATGAGGAGATTAAGACTGTTGTATTTTGA 993 45.22 MTVLRRIYSRLPQVLGLTRKPFNSWKFPGELLNSFSSTTTTTTATHGVHVFHCPDVVGIVAKLSECIASRGGNILSVDVFVPENKQVFYSRSEFVFDPVRWPRVEMDEDFLKLSKLFNAMKSVVRVPNLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDINCVISNHDRGPNTHVIRFLERHGIPYHYLRMTKGNKRDGEILDLVQNTDFLVLARYMQILSGKFLEGYGKDIINIHHGLLPSFKGGNPSKQAFDAGVKMIGATSHFVTEELDAGPIIEQMVERVSHRDNLRSFVQKSENLEKQCLAKAIKSYCELRVLPYEEIKTVVF 330
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01017 330 PRINTS Formyltetrahydrofolate deformylase signature 134 156 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Eupl14g01017 330 PRINTS Formyltetrahydrofolate deformylase signature 49 75 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Eupl14g01017 330 PRINTS Formyltetrahydrofolate deformylase signature 156 183 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Eupl14g01017 330 PRINTS Formyltetrahydrofolate deformylase signature 281 303 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Eupl14g01017 330 PRINTS Formyltetrahydrofolate deformylase signature 303 328 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Eupl14g01017 330 SUPERFAMILY Formyltransferase 134 323 IPR036477 GO:0009058(InterPro)
Eupl14g01017 330 CDD ACT-F4HF-DF 48 119 IPR044074 -
Eupl14g01017 330 ProSiteProfiles ACT domain profile. 48 131 IPR002912 -
Eupl14g01017 330 PIRSF FormyFH4-hydr 44 330 - -
Eupl14g01017 330 PANTHER FORMYLTETRAHYDROFOLATE DEFORMYLASE 18 330 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Eupl14g01017 330 Pfam Formyl transferase 134 311 IPR002376 GO:0009058(InterPro)
Eupl14g01017 330 CDD FMT-core-Formyl-FH4-Hydrolase-C 133 330 IPR041729 GO:0008864(InterPro)
Eupl14g01017 330 SUPERFAMILY ACT-like 51 118 IPR045865 -
Eupl14g01017 330 Gene3D - 50 119 - -
Eupl14g01017 330 Gene3D - 120 328 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01017 K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]