Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01020 | ATGTTAACATCAGTCGTAGCGAGACCTCCGTCTACAGACGTAAAGTTGGCGGCGATCGCTGTGGGTCTAAACGTACGGTTGAGATCAGCCGATATGCCGGCAGACATGCAAGAGCGAGCCTTCAGACACACCAGAGAACTTATAGACACAGCAGCCAACAACCGACCCAACTCCACCCAGATAGCTCTCGCCCTCAAGAAGGAATTCGATGCGTCGTACGGTCCAGCGTGGCACTGCATAGTAGGGAAGAGTTTCGGATCGTTCGTGACTCACTCGCCGGGAGGATTCCTGTACTTCTCCGTCGACAAGCTCTTTCTTCTTCTTTTCAAAACGGAGGTCCAACCAGTGATCGAGTCTCCTCCTTGA | 366 | 52.73 | MLTSVVARPPSTDVKLAAIAVGLNVRLRSADMPADMQERAFRHTRELIDTAANNRPNSTQIALALKKEFDASYGPAWHCIVGKSFGSFVTHSPGGFLYFSVDKLFLLLFKTEVQPVIESPP | 121 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01020 | 121 | CDD | DLC-like-DYNLL1-DYNLL2 | 24 | 111 | - | - | |
| Eupl14g01020 | 121 | Gene3D | Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 21 | 111 | IPR037177 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Eupl14g01020 | 121 | FunFam | Dynein light chain | 15 | 112 | - | - | |
| Eupl14g01020 | 121 | SUPERFAMILY | DLC | 23 | 111 | IPR037177 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Eupl14g01020 | 121 | SMART | Dynein-light-2 | 20 | 111 | IPR001372 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Eupl14g01020 | 121 | PANTHER | DYNEIN LIGHT CHAIN | 24 | 112 | IPR001372 | GO:0005868(PANTHER)|GO:0007017(InterPro)|GO:0030286(InterPro)|GO:0045505(PANTHER) | |
| Eupl14g01020 | 121 | Pfam | Dynein light chain type 1 | 25 | 111 | IPR001372 | GO:0007017(InterPro)|GO:0030286(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01020 | K10418 | dynein light chain LC8-type |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr10:24118736 | Eupl14g01020 | Eupl-Chr14:16693454 | dispersed | |
| Eupl | Eupl-Chr11:8129618 | Eupl14g01020 | Eupl-Chr14:16693454 | dispersed | |
| Eupl | Eupl-Chr14:16693454 | Eupl6g00931 | Eupl-Chr6:15037577 | dispersed | |
| Eupl | Eupl-Chr14:16693454 | Eupl4g00881 | Eupl-Chr4:13561294 | transposed |