AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01024 ATGGTCAAGAAGATGGATTTGAGAAAGAGAAGAGGAGATGAGAAACGTTGTTGCTCCTCCTCAAAGGAAGAGATCGAGGGGATGGAGCAACATATCGTATGGAGGATGACTCTAGAAAAGAGAGTCAGCACTGTGGTGCACCATCTGCAACTCCAGTCGGCCATGTTTGAAGAGGAGAACTGGTGGTTGGAGAACTACACGTTGGGGAACGCTGTGCTTGGAGGATGGAGTTGTGGAAGAGGAGGCAGCCACGAGTTGGAGAAGACGTTGATGGTGCAGTCATGGAAGACAGCAGGAAGGAGAACTGCCCACTGTTTCAGAGGTGAGAAACTTGGTAGTGGAGTGACCGTGGTGGGGGAGCAACCACCAAGAGGAACCGCCAATCTGTGGAGGTTTACAGCTCATGTTTTCAACTACGAAGACGACGATGAATTAAGTGTGGCCGTAGTGAACGAAGAAAGTTTTCATAACTGTGTACCGGGCGATGGATCGCAGATTTACGACTCGGGGCACGATCATATCGCGCTGATTGAGGGTCCTAACTACTTCATATGTCCCGACGAGAATAATTGTGTGCTTGGCATGAATATTGTTGTTAATGCAACAAAATATTAA 615 48.13 MVKKMDLRKRRGDEKRCCSSSKEEIEGMEQHIVWRMTLEKRVSTVVHHLQLQSAMFEEENWWLENYTLGNAVLGGWSCGRGGSHELEKTLMVQSWKTAGRRTAHCFRGEKLGSGVTVVGEQPPRGTANLWRFTAHVFNYEDDDELSVAVVNEESFHNCVPGDGSQIYDSGHDHIALIEGPNYFICPDENNCVLGMNIVVNATKY 204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01024 204 Pfam Plastocyanin-like domain 136 195 IPR003245 GO:0009055(InterPro)
Eupl14g01024 204 Gene3D - 128 201 IPR008972 -
Eupl14g01024 204 SUPERFAMILY Cupredoxins 136 201 IPR008972 -
Eupl14g01024 204 ProSiteProfiles Phytocyanin domain profile. 88 203 IPR003245 GO:0009055(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01024 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:16781126 Eupl9g01320 Eupl-Chr9:26521534 dispersed