Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01029 | ATGTCGAAGGAATCGTTTCAACCTCGAGCGGTTGGAGATGGCGACCGTACTAATTTCGCTCGGACATTCAAATATCTCATGGCTACTCAGTTTTTGTCGAGGGGAATTCCCTTCATTTTCAATTCGTGGATCGTTAGACACCTTACTGAAGAGGACTATGCGATTTTTGCAGTGCAATTTCATCTTTTCGTCACATGTATCTTGTTTCTTAGTCGGGAAGGATTTCGGCGAGCATGCTTGCGGACTGACGTCAGATGTGATGGTGCATCAATGGAAGAAAATGCCGTAAAATTACTGAAAGTAGCCTGGATGACTTTCCCAATTGGAATATTGATTACATTTGTTGCATGCATCTTTGTCTTCTGGTGGCAAGCTCTAAACATATCTAGTCCATACGCGCAAGCTATCTTAATCCATGGATTTGCATGTATATTGGAGCTATTGGCAGAACCTTTGTACATTCTTTCTCAGAACTTGCTTCTCCTTGAATTGCGATTGATGGTTGAAACTGCGGCTACACTTTTACGTTGCACGACTACATACATTCTCATTGTCAAGCAAACTAATATGGAAAAAGCGATTGTATTTGCATTATCACAGACAGCTTATGGTGCTTGCTTGTTCTTAGGCTATTGGGGCTACTTTCTTCTCTTTCACATGGTTAGAAATTCCGACCTTTTCCCTTTCAGAATAGGAAATTTGATGGATTATGATAGGCAGCTTTCACATATGTGCATGTTGTTCACCCGCCAATCCTTCCGGAAATTGGTCCTTCAAGAAGGAGAAAAGATGGTTCTAGTATGGTTAGACACTCCATATAACCAAGCTGTATATGGACTTGTAGACAAATTAGGTAGTTTAGTTGTGAGATTGGTGTTTCTTCCTTTCGAAGAAAGTTCCTATGCAACATTTGCAAGGTTTGCATCAGGACAATACCCTAATAGAAACATGAAGTTAGGGAGTTCCCTCACAGAGGCCCTAAAGCTTGTTCTGTTGATTGGTCTTGTGGTCATGGCATTTGGCCCGAGCTACTCTTATGCTCTTATTAGAGTGTTGTATGGTAGGAAATGGAGTGATGGAGAAGCCCCCACTGCCCTCCGTTATTATTGCCTTTATGTCATTGTTTTGGCTATGAATGGAACATCTGAAGCATTTCTACATGCAGTGGCGTCCGAGAACCAACTCAAGCATTCAAATGATTCCTTGCTCATATTCTCTGGGATATACATAGTATTGAATGTCCTGCTGATTCGATCAGCCGGTGCAATTGGGTTAATTGCTGCTAATTCATTAAATATGCTTTTGAGGATTATTTACTCTGCAGTATTCATCAAGCGGTATTTTCAGGGTTCTCCCTTTTTTGCTTTCCACCGTTGCTTGCCTTCAGGTTGGATAGTTTTGCTTCTTTCTAGTGTCACCACACTCATTTCCGAGAGAATATTCTTAGATCGGGAAAACTTCTGGCCAACCATGTTCATTCACTTCTCCATTGGCTTAGCATGCTTCTGCATATCCTCCATTGTAATATATCGCCGCGAGAGGCTTTATATTAATAAAATCATTCGTTTTCGTGACCACATCGAGTGA | 1587 | 41.27 | MSKESFQPRAVGDGDRTNFARTFKYLMATQFLSRGIPFIFNSWIVRHLTEEDYAIFAVQFHLFVTCILFLSREGFRRACLRTDVRCDGASMEENAVKLLKVAWMTFPIGILITFVACIFVFWWQALNISSPYAQAILIHGFACILELLAEPLYILSQNLLLLELRLMVETAATLLRCTTTYILIVKQTNMEKAIVFALSQTAYGACLFLGYWGYFLLFHMVRNSDLFPFRIGNLMDYDRQLSHMCMLFTRQSFRKLVLQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQYPNRNMKLGSSLTEALKLVLLIGLVVMAFGPSYSYALIRVLYGRKWSDGEAPTALRYYCLYVIVLAMNGTSEAFLHAVASENQLKHSNDSLLIFSGIYIVLNVLLIRSAGAIGLIAANSLNMLLRIIYSAVFIKRYFQGSPFFAFHRCLPSGWIVLLLSSVTTLISERIFLDRENFWPTMFIHFSIGLACFCISSIVIYRRERLYINKIIRFRDHIE | 528 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01029 | 528 | Pfam | Rft protein | 21 | 521 | IPR007594 | GO:0006488(InterPro)|GO:0016020(InterPro) | |
| Eupl14g01029 | 528 | CDD | MATE-rft1 | 18 | 450 | - | - | |
| Eupl14g01029 | 528 | PANTHER | ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED | 17 | 524 | IPR007594 | GO:0005789(PANTHER)|GO:0006488(InterPro)|GO:0016020(InterPro)|GO:0034203(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01029 | K06316 | oligosaccharide translocation protein RFT1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:17000079 | Eupl14g01350 | Eupl-Chr14:31498695 | wgd |