AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01032 ATGGGTGGTGGAGGAGGAAGAGGAGGAGGGATGCTTCGGGCAGTTGGAAAGACAGTTGGTGGTGCAGGTGTTGGGGGAGTTCAGGAAGCTTTCTCTGCATCCACAACAAGACCCTACAAGCCTACTACAACTAATCTCCTCTCTTTACCATCCAACTCTTCATCAACAAGACCCTACAAGCCCACTGCCCTACAAGCCACTTCTACTGCTTCGGCAACTTGGCCTTCCTCTTCAAGTTCTGGCTTCTATGACTGTGATGACTGGGAGTTGGAATCCTTGGAGGGTGGAGCAGAAGAAAGAGCAAATGGGTTCTATGATCAATTCGTTTTTGGCCCTGTTCCATCAAAGGATGAAGTAGAAGATGCTGTCTCTTCTCTTCAACAGGTCCTTGCCACGGCCTCATATTCAGAGCTCGTTGGAGATAGATTTGTCTCTAGTTCAGACAAGGACATAGCTGATCGAATTGTTAGTCCTACTGGTTTGAAGCACATAGTTTCTTCGGAAGGGCCAGTGTTGGATTTGATCGAGCCCACGCACCACCTTTCTAATCCAAGAATTTTGCAATCTCGGGGATGTGGAAGAGTTAATGATGCCTTCCGTTTACTGCATACACAACCAACTGTTCAGAGACTGGTCGTTTCGTTATCTACTGATAAAGCTGTGTGGGATGCTGTTTTGAACAATGAGGTGGTACGGGAATATAGAGACTCATTCTTCTCAGCTGAAAACAATAGGGGAGGGAGCTCCGATGGAAGCCCCGACCCAGCAACGAGCATAATGAGGTGGATTTTGGACAACACTAAGGCAATACTGATGGAATTGATCGAGAAAATTACAAAGCTCGTGAATGAGATGTTTCAACCTCCTGAGAGGGATAAGACGACATCGTCAATCACAGATCTCTTGGAGGAGACACTGAGATCCTCACTCTTTCTCTCTGTTGTTATCTTCCTGATTATCGTGGTTACGCGGGCTCACAGAAAATGA 987 46.71 MGGGGGRGGGMLRAVGKTVGGAGVGGVQEAFSASTTRPYKPTTTNLLSLPSNSSSTRPYKPTALQATSTASATWPSSSSSGFYDCDDWELESLEGGAEERANGFYDQFVFGPVPSKDEVEDAVSSLQQVLATASYSELVGDRFVSSSDKDIADRIVSPTGLKHIVSSEGPVLDLIEPTHHLSNPRILQSRGCGRVNDAFRLLHTQPTVQRLVVSLSTDKAVWDAVLNNEVVREYRDSFFSAENNRGGSSDGSPDPATSIMRWILDNTKAILMELIEKITKLVNEMFQPPERDKTTSSITDLLEETLRSSLFLSVVIFLIIVVTRAHRK 328
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01032 328 Coils Coil 264 284 - -
Eupl14g01032 328 MobiDBLite consensus disorder prediction 31 80 - -
Eupl14g01032 328 PANTHER OS08G0179900 PROTEIN 8 326 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01032 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:17098152 Eupl14g01347 Eupl-Chr14:31420490 dispersed
Eupl Eupl-Chr8:21546345 Eupl14g01032 Eupl-Chr14:17098152 transposed
Eupl Eupl-Chr14:17098152 Eupl14g01346 Eupl-Chr14:31411609 wgd