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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01041 ATGAATGGGTTTCGTAATCTTTTGAAGGATGAAGAGCTTGATATCAGTTCAATCACTACCCTCCGCGTCCATAGCTTGAAGGATGAAGAGCTTGATATCAGTAATATCAGTTATACGATCCAACAAGACATAACGCTAGCAAATCTCAGAGATGGGAGTTGGGTCTCAGTCCCACCTCAACAGAACTCCTTCTTCATCAATGTTGGGGACTCCTTAGGGCCGGAGCACTTCACCATCGACTCCGATAAATCCGGCGATGGAGGGCTTGATCTCCGGCGGAGAGAAGATTATAGAAGAGAGAGAGAGAGAGAGAGACCCGTGAAGGACCTTGGGAGAGACACGAGACTTGCTGAAATTGGAAATTCGACTTCCGCTTCTGAATAG 384 46.88 MNGFRNLLKDEELDISSITTLRVHSLKDEELDISNISYTIQQDITLANLRDGSWVSVPPQQNSFFINVGDSLGPEHFTIDSDKSGDGGLDLRRREDYRRERERERPVKDLGRDTRLAEIGNSTSASE 127
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01041 127 MobiDBLite consensus disorder prediction 76 115 - -
Eupl14g01041 127 MobiDBLite consensus disorder prediction 76 127 - -
Eupl14g01041 127 Pfam 2OG-Fe(II) oxygenase superfamily 31 72 IPR044861 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01041 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:17318320 Eupl2g01147 Eupl-Chr2:19953431 dispersed
Eupl Eupl-Chr14:17318320 Eupl6g01357 Eupl-Chr6:23514847 transposed