Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01044 | ATGACGAGTCGCCGCTTCTTTACAGCGATCCTCTTCATTTTCTTCCTGTCCGCCGCGGCCGGAGACTCCAAATCTGATGAGTGCGTTTACACCATTTACATCAGGACAGGATCCATCATCAAGGCCGGAACGGACTCCAAGATCAGCGTTTCCTTCGGTGATGCAGCGGGCCGATCAGTGCAAATCCCAGATCTCGAGGCATGGGGATTAATGGGACCCACATACGACTACTACGAGCGGGGTAATCTCGACATATTCAGCGCCCGGGGTCCATGCATAGGCGCTCCACTCTGCAGTCTTAACATAACATCAGACGGATCAGGAGCCCACCACGGGTGGTACTGTGAATACTTGGAGGTGACATCCACTGGGGCCCACAAGGACTGCAGCCAGACCATTTTCTACGTCCAGCAGTGGCTTGCCAGCGACGCTCCTCCCTACGCGCTCACTGCGCTCCTCGATGGTTGTGCACAACAAACTACCACTACCACTACCACTACCACCCCTGCGGCGCACGCTAGAAACGGGCCTCTCGTTGTTGGGAACCTTCAAGGAGCTGTTTCTCAGTAA | 570 | 55.26 | MTSRRFFTAILFIFFLSAAAGDSKSDECVYTIYIRTGSIIKAGTDSKISVSFGDAAGRSVQIPDLEAWGLMGPTYDYYERGNLDIFSARGPCIGAPLCSLNITSDGSGAHHGWYCEYLEVTSTGAHKDCSQTIFYVQQWLASDAPPYALTALLDGCAQQTTTTTTTTTPAAHARNGPLVVGNLQGAVSQ | 189 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01044 | 189 | SUPERFAMILY | Lipase-lipooxygenase domain (PLAT-LH2 domain) | 29 | 143 | IPR036392 | GO:0005515(InterPro) | |
| Eupl14g01044 | 189 | Pfam | Embryo-specific protein 3, (ATS3) | 22 | 126 | IPR010417 | - | |
| Eupl14g01044 | 189 | PANTHER | PLAT DOMAIN-CONTAINING PROTEIN | 11 | 162 | - | - | |
| Eupl14g01044 | 189 | ProSiteProfiles | PLAT domain profile. | 28 | 154 | IPR001024 | GO:0005515(InterPro) | |
| Eupl14g01044 | 189 | Gene3D | PLAT-LH2 domain | 29 | 145 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01044 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr13:35487156 | Eupl14g01044 | Eupl-Chr14:17421346 | dispersed | |
| Eupl | Eupl-Chr14:17421346 | Eupl3g01422 | Eupl-Chr3:40306515 | dispersed | |
| Eupl | Eupl-Chr14:17421346 | Eupl14g01338 | Eupl-Chr14:31127096 | wgd |