AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01046 ATGATTCCTCACTTATACGCCATGGATTCTCAGAACAAAGCTCAAGAACTCGCGTCGATGATCTTCGCCTCTTCATCTACTTTAAAGATCTCTGCCGCTTGTGCTGCAATCGAAACCTTCCTACAAAAACACACTGCAGACCAGAGCCGATCGTTCTTCTCGATTGCGTTTCCTGTCTTAATTTGCAAGATCTTCGGTTTCGATGAATCATCGTCGCCTCAATCTCGTTCATCTTCTTCTAATGGATGGATCGATCAGATTCACGCTTCAAATGATTCTGAGCTTGCAAATCGGGTTTTCAATCTCCTCTCTCCGTCTGGCATTTTGTTTTCGTCAATTTCTTCTGTAGATAGGCATTCTCTAGTGAAATATGTTTTCCCGGTGGAGAGATTGCCCGAGTGGGCGAGGTTTATGCTTCAGAGTGATAGAGATTGTCGTGTTCTATCGGATTTGTGTCCGTTGTTTAAAGGTAGGATCAAGGAGGATACGATCAAGGGTTTGTATCAGGTTCAGTTGAATGTGTTTGAGTACTACATGTTCTGGTTTGCTTATTATCCTGTTTGCAAAGGGAGCAGTGAGAATTCTAATGCAGTAGCAGTCAAGAGGACTCGAAGGTTTAGGTTGGAGAAATGGACCTCTTCTTTTCCGGTTTTGGCAGGTGCCACCCGTGGACCAGGGCAGAAAACTCAGTGTGGCTTGTACAGTCGACTTCTTTATGCCTATCTCCGCACATTTGTGCCAAATTATGGTTCCAATGCTCATCAGCCTTACCGTAGTTCTCTTCTTCACTATTCATCGGGCTGTGATGGTTCAGTTCTCTTGCGAGTGGAGTTCATGGTTTATACACTGATACACTTTTGGTTGGTTGATAATGATTTCTCACCAATGCCCGTGAATGTATGCCGATCATTTGGTGTGTCTTTTCCTTTTCGAGCAGTTTTGGGTGAGATGCCCCCGACCTCTGGGTTGGGGGAAGTGGTGATGTTATTTGTGAAATATTTTAATAGTAGCTTGGTTTTTCTTAAAGAAGTGTCTGAACCAGTTGAATATACTGGAAGTCCTCAGTGGAGGGTCTCAGGTTCTGTTGACTCTGTGAAGTCCAGGGCTGCTGTGTCACAAAGTTCTGTTGGTTCTTGGAACTTATTGATCCAGAGGCCATTGTACAGGTTTATATTGAGGTCATTTTTGTTCTGCCCGATGGGAACTTCAATCAAGAATACATCTCAGATATTTTCCCTTTGGATTAGCTACATGGAGCCTTGGAAAATAAACTTGGAAGATTTTGCGCAGCTTGATGCACTTATAGATCAATCCACTGAAAACTCAAAAAATGAGAAGACTCAGTTCCCAGTTGAAAAGGATGTCATCAGGGACAATTGCCAATCAGCATGTGGTTATACATCTTCTTGGCAAGGCCATGTGCTGTCCAACTATCTATTTTATAGCTCTTTGGTTATGCATTTTCTTGGGTTCGCACACAAGTTTCTTCACACCGATGCAGAAACGATAATTCAGATGGTGGTGAAGGTGCTGAACATTTTGACTTCATCAAGAGAGCTGATGGACCTTATAAAGAAAGTTGATGCTCTATTTCATTCTAAACTGGCTGGATCTTCCTTACCGATGTTCGATAGTTCATATAAATGTGTCCCGTCCATACGTGAACAGTTGCAGGATTGGGAAGATGGCTTATGTGAGAGTGATGCTGATGGATCCTTCTTGCATGAGAATTGGAATCAAGATTTACGACTTTTTAGTGGTGGTGAAGATGGTGGACATCAACTACTTCAGCTGTTGATATTGCGTGCCGAGTCCGAAATCCAAGCTATTTCTGGTGATAATCTTGCAAGGAATCTTCAGACGCTAGACTCTCTGAAAGCCGAAATGGGTTCCCTATTTGGTGGCCCTGTTGGGAGGCCCGTGTCAGTCACGCCAGAAGTGCAGCAGTATCAGCATGTCCGGGATGAAATATTCAAGCCCAGGTCGGGTGGAAACCGCACATTGGCTGATTGGAAATACAAAGGTGACTGGATGAAGAGGCCCATATCCGAGGGAGAGGTTGCATGGATGGCAAGGCTGCTCGTCAGGTTATCTGATTGGCTGAATGAGATTCTTGGACTAAACCACCAGGGACAGAGCAGCCACACAGGCCCATCTTGGTCATATGTTGACGTGTCTAATGATGACATGGGTAAAGTGGGTGGGCCCAAGGAGGCCATCAAGATTTTGTTATGTTCTGTTGGGTCGTGGCTTGTGTTGTTGGGGCTGGCAGTCGCAAGGTCCATGAGGGAGCATGGGCTAAGGGTTAACTTGAGGGTGTTTGCTTCAAAGAAGGTTGTGATTGTTTTGCTTTTATCTGCTGTGTTTACTGTGTTGAGGAAGGTTTTTGGGCTGTTTCAGCATTTGCCTTACTGTAAATTAGGGTAA 2427 44.38 MIPHLYAMDSQNKAQELASMIFASSSTLKISAACAAIETFLQKHTADQSRSFFSIAFPVLICKIFGFDESSSPQSRSSSSNGWIDQIHASNDSELANRVFNLLSPSGILFSSISSVDRHSLVKYVFPVERLPEWARFMLQSDRDCRVLSDLCPLFKGRIKEDTIKGLYQVQLNVFEYYMFWFAYYPVCKGSSENSNAVAVKRTRRFRLEKWTSSFPVLAGATRGPGQKTQCGLYSRLLYAYLRTFVPNYGSNAHQPYRSSLLHYSSGCDGSVLLRVEFMVYTLIHFWLVDNDFSPMPVNVCRSFGVSFPFRAVLGEMPPTSGLGEVVMLFVKYFNSSLVFLKEVSEPVEYTGSPQWRVSGSVDSVKSRAAVSQSSVGSWNLLIQRPLYRFILRSFLFCPMGTSIKNTSQIFSLWISYMEPWKINLEDFAQLDALIDQSTENSKNEKTQFPVEKDVIRDNCQSACGYTSSWQGHVLSNYLFYSSLVMHFLGFAHKFLHTDAETIIQMVVKVLNILTSSRELMDLIKKVDALFHSKLAGSSLPMFDSSYKCVPSIREQLQDWEDGLCESDADGSFLHENWNQDLRLFSGGEDGGHQLLQLLILRAESEIQAISGDNLARNLQTLDSLKAEMGSLFGGPVGRPVSVTPEVQQYQHVRDEIFKPRSGGNRTLADWKYKGDWMKRPISEGEVAWMARLLVRLSDWLNEILGLNHQGQSSHTGPSWSYVDVSNDDMGKVGGPKEAIKILLCSVGSWLVLLGLAVARSMREHGLRVNLRVFASKKVVIVLLLSAVFTVLRKVFGLFQHLPYCKLG 808
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01046 808 PANTHER ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 24, MITOCHONDRIAL 1 796 - -
Eupl14g01046 808 Pfam Mitochondrial-associated sphingomyelin phosphodiesterase 29 201 IPR024129 GO:0050290(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01046 K12353 sphingomyelin phosphodiesterase 4 [EC:3.1.4.12]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:17444513 Eupl14g01336 Eupl-Chr14:31095574 wgd