AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01050 ATGGAAACAAATCTCTCTAGACAAGAAAATACCGCCGAAAATGAAAGCAATGCCATCGAGTGCTTGAAAAGGCAGGATCATCACCCCATTGTCGACGCACAAAAGAAGCCTTTTTTGGCCGGACATGTACTGCTCAACCCGGATTGTAGCCCCACATGCAACGGGTTAGGGCACATTATTCAAGTCGGTTGTCTGTACGAAATCGATCACGAAAAGTTACCACCGAAATCCCCAATCCACCTCAAAGCAATTCGAGCAGTCATGGTAACCGAGAAGACGGAGCACAACGTATCGGTCAGGTTCCCGAGCACCCTTTCTCTTCGTACATACTTCATGAGGGTTTCTGGAGAGGAAATGGATCAGAATCTAGCAGGGAAAATGCACCCAGCACTAGACGAACAATTCGTGATGAGATCGAATCTCGCGGGAAAAGTTCTCGTTCGGCAAATTCCATCTCCCGAGTTTGCGGCAGAAAAGAACCTACAGAGCTTCTGGTTGGAATCCCCGAAAGCCATAGAAATCCCTATTTCAGTCACCAAAGAAGGATCGAGGGATGATAGTTTGATAAAGGGAATGTGCTGGTCGTCGCTAAGATGCGCTGGGTTGGTGCACTGGGGTGTGCGGAGGAGAGTAAACTTCATCGGCCGACACAGAGAAAAGACCCCAGTAGGACCGTCATCGTGGTGCGTGATGGAAGAAGAAGATGCGGTAAAGACGGACGCCAACGCCAACGCCAAGGAAGAGACGAAGAAGGGAACGCACGAGATTTCGAGCCACAACAGAAAGGCGAAATCAGCGAAGCGCGAGAAGAAGAAAGCTAACACCTGTAAAAACAACAACAACAACAACAACAACAACAACAATAACAAAAACCGTAGTCGAGAGAAGCTGAAGCTCTCTTACGACAGATGGTCTAACGAGAGGTATAAGACAGCGGAGGTGAAAATGTTGGAGATCATGAAGGAGAAAGGAGCGGTGTTCGGGAAGCCCATGCTCCGGCAAATGCTGAGAATGGAAGCTCGGAAGCACATTGGGGATACTGGGCTTCTAGACCACCTGCTGAAACACATGGCGGGGAAGGTGGCACCGGATGGGAAAGAGCGGTTTCGTAGGCGGCACAATGCTGACGGAGCGATGGAGTACTGGCTTGAAAGCGCAGACCTCGTTAACGTCCGGAAAGAGGCCGGTGTGAAGGATCCTTACTGGAACCCACCACCGGGATGGAAGCTCGGTGATAGCCCTTCCCAAGACCCCATTTGTGCTAGGGATTTGAAGCTGCTTAAAGAAGAGATGGCCAACATTAAGAGAGATGTGAAGGAGCTACTGTCATTGAACGAGGCACCAGCAAAGTCTGTTAGCAACAATTCCAAGTTAGAATCAGATACTACTGTGGTTCCATTACAGGAAATGTATCAAAGTTTGGTGAAGAGAAAATCACAGCTCGAGCAACAGCTTGCTGAAATTTCTAATTCTCTCAACGGGATGCAGGAAGAGATGAGGAGGCTTACATCGACGGTGGAAGAGAGTGCAAAGTCAGCAGAAGTGGAAGTAGGAGCAGGTAAGGACAAGAGAGGGAGAAGTGAGGAAGAGAAAGAAGAAGCAGCAGCAGCAGCAGCAGAAGAAGAGGCAAAAGCAAAAGCAGCAAAGCGACAGAGGCTGAGGAGCGGGTTCAGGATATGCAAGCCTCAGGGGACGTTTTTGTGGCCAAACATGGGTGGCAGCGCGGGATGCAGCAACAAGTTGTCTCCTCATCAGGTGGTGGTGCAGGTAGAAGATCTATTAATGGTCCCCACACCAAACTCAGTGTCATCGGCAACGTCGGCACCACCAAGACTATTGGCAGCACCTCAGCCAACGTCCCCAGTGAAACCCTTGGCGGAGAGAAGAGCCGTTACAGTTACCGTGTCGTCCGTGGTGATACCCGAATTCGCATGCGAGGGGGACAACAGCAGTACATCCCATCACCACCAGAATGACGAGGAAAACAACCAGCACGACCAGCACAACAACGGATTCTGTGGGACCCCCACGTCCTCATCCGGCTACCAACGTACTCTCGTCCTCCCACATCATGTATCGTGTGGAGGAGAGAACGAGGTACGGTTGGAGGCAGTAGGGAGTAGCACAACAGTAACGAGTAGGACAGAAATGATACAGTATCAAAGGAAGCAGCAGGTGGAAGAGGGGAGGGACACGTATGGTGGGGGGAGGTGGCTGGCTCTGGCTACTCCAAACCCAGCTTTATTATAG 2250 50.58 METNLSRQENTAENESNAIECLKRQDHHPIVDAQKKPFLAGHVLLNPDCSPTCNGLGHIIQVGCLYEIDHEKLPPKSPIHLKAIRAVMVTEKTEHNVSVRFPSTLSLRTYFMRVSGEEMDQNLAGKMHPALDEQFVMRSNLAGKVLVRQIPSPEFAAEKNLQSFWLESPKAIEIPISVTKEGSRDDSLIKGMCWSSLRCAGLVHWGVRRRVNFIGRHREKTPVGPSSWCVMEEEDAVKTDANANAKEETKKGTHEISSHNRKAKSAKREKKKANTCKNNNNNNNNNNNNKNRSREKLKLSYDRWSNERYKTAEVKMLEIMKEKGAVFGKPMLRQMLRMEARKHIGDTGLLDHLLKHMAGKVAPDGKERFRRRHNADGAMEYWLESADLVNVRKEAGVKDPYWNPPPGWKLGDSPSQDPICARDLKLLKEEMANIKRDVKELLSLNEAPAKSVSNNSKLESDTTVVPLQEMYQSLVKRKSQLEQQLAEISNSLNGMQEEMRRLTSTVEESAKSAEVEVGAGKDKRGRSEEEKEEAAAAAAEEEAKAKAAKRQRLRSGFRICKPQGTFLWPNMGGSAGCSNKLSPHQVVVQVEDLLMVPTPNSVSSATSAPPRLLAAPQPTSPVKPLAERRAVTVTVSSVVIPEFACEGDNSSTSHHHQNDEENNQHDQHNNGFCGTPTSSSGYQRTLVLPHHVSCGGENEVRLEAVGSSTTVTSRTEMIQYQRKQQVEEGRDTYGGGRWLALATPNPALL 749
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01050 749 Coils Coil 524 551 - -
Eupl14g01050 749 MobiDBLite consensus disorder prediction 276 290 - -
Eupl14g01050 749 MobiDBLite consensus disorder prediction 514 543 - -
Eupl14g01050 749 MobiDBLite consensus disorder prediction 239 262 - -
Eupl14g01050 749 MobiDBLite consensus disorder prediction 646 677 - -
Eupl14g01050 749 Coils Coil 424 444 - -
Eupl14g01050 749 MobiDBLite consensus disorder prediction 503 543 - -
Eupl14g01050 749 Coils Coil 5 25 - -
Eupl14g01050 749 PANTHER PROTEIN DYAD 60 664 IPR044221 GO:0007131(InterPro)|GO:0051177(InterPro)|GO:0051321(InterPro)
Eupl14g01050 749 MobiDBLite consensus disorder prediction 652 666 - -
Eupl14g01050 749 MobiDBLite consensus disorder prediction 239 295 - -
Eupl14g01050 749 MobiDBLite consensus disorder prediction 601 620 - -
Eupl14g01050 749 Coils Coil 471 512 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01050 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:17596209 Eupl14g01331 Eupl-Chr14:30893097 wgd