AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01051 ATGGTGAAAGCAATCAGAGTCCATGAGCTTGGTGGACCAGAGGTTCTGAAGTGGGAGGATGTAGAAATCGAAGAGCCAAAAGAGGGTGAGGTCCGAGTGAAAAACAAGGCAATCGGGCTCAACTTCATTGATGTTCATTTCCGCGAAGGAGTTTATAAAGCTGCTACAATGCCTTATACCCCTGGCATGGAAGCAGTTGGGGTGGTGACAGCTGTTGGCCCCGGATTAACTGGAAGGAAAGTTGGGGATGTAGTTGCTTATGCTGGTAAGATGGGCTCATACACCGAAGAACAGATCCTTCCTGCAAGTGTTGTAGTGCCCGTTCCTTCTTCTATAGATCCTATTGTTGCAGCGGCTGTCATGCTTAAGGGTATGACTGCTCAGTACCTACTCCGCCGGTGCTTCAAGGTCGAATCCGGACACACCATCCTTGTCCATGCAGCAGCTGGAGGAGTTGGGTCTTTATTGTGCCAGTGGGGAAATGCCCTTGGTGCCACCATTATTGGAACAGTGTCGACAGAAGAGAAGGCAGCCAAAGCCAAGGCGGATGGATGCCACCATGTTATAAACTACAAGCAAGAGGATTTCATTGCTGCTGTCAAGTCAATAACATCAGGCAAAGGAGTTGATGTTGTCTACGATGCCGTGGGACAAGATACATTCCAGGGATCGTTGGCGTGCTTAAAGACTCGTGGGTACATGGTGAGCTATGGGCAGTCATCAGGCATACCAGACCCAGTTCCATTGTCGGCCCTCCAGGCGAAATCTTTGTTCTTAACGAGGCCTGGGATCCTGCACTACACAGAAACACGAGATGAGCTACTGGAAGCTGCCGGAGAAGTGTTTGCCAATGTTGCATCAGGTGTCTTGCAGGTCCATGTTAACCACACGTACCCTCTGTCACAAGCAGCTCAGGCTCACGCAGACCTCGAGGGTCGGAAAACAACTGGTTCTGTAGTGCTGATACCAGATGGTGTTGAGCTGTAA 987 50.15 MVKAIRVHELGGPEVLKWEDVEIEEPKEGEVRVKNKAIGLNFIDVHFREGVYKAATMPYTPGMEAVGVVTAVGPGLTGRKVGDVVAYAGKMGSYTEEQILPASVVVPVPSSIDPIVAAAVMLKGMTAQYLLRRCFKVESGHTILVHAAAGGVGSLLCQWGNALGATIIGTVSTEEKAAKAKADGCHHVINYKQEDFIAAVKSITSGKGVDVVYDAVGQDTFQGSLACLKTRGYMVSYGQSSGIPDPVPLSALQAKSLFLTRPGILHYTETRDELLEAAGEVFANVASGVLQVHVNHTYPLSQAAQAHADLEGRKTTGSVVLIPDGVEL 328
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01051 328 SMART PKS-ER-names-mod 11 321 IPR020843 GO:0016491(InterPro)
Eupl14g01051 328 Gene3D - 123 267 - -
Eupl14g01051 328 Pfam Alcohol dehydrogenase GroES-like domain 28 109 IPR013154 -
Eupl14g01051 328 Pfam Zinc-binding dehydrogenase 151 256 IPR013149 -
Eupl14g01051 328 CDD QOR2 3 323 IPR047618 GO:0003960(InterPro)
Eupl14g01051 328 SUPERFAMILY GroES-like 2 144 IPR011032 -
Eupl14g01051 328 Gene3D - 11 317 - -
Eupl14g01051 328 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 3 323 - GO:0003960(PANTHER)|GO:0005829(PANTHER)|GO:0016651(PANTHER)|GO:0017091(PANTHER)|GO:0070402(PANTHER)
Eupl14g01051 328 FunFam Quinone oxidoreductase 1 123 267 - -
Eupl14g01051 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 112 273 IPR036291 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01051 K00344 NADPH:quinone reductase [EC:1.6.5.5]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:17634617 Eupl14g01052 Eupl-Chr14:17664171 tandem
Eupl Eupl-Chr14:17634617 Eupl14g01330 Eupl-Chr14:30849195 wgd