AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01053 ATGGAGTCATCATCAGTAGCCGTTGATCACCATCATAACAATCAGTTCCAGCAAAACGTGGTGGTGATGAGGCACGGTGATCGGATCGACAGCGCGGAGCCCCTGTGGATATTAACGGCCGCCAGGCCGTGGGACCCACCCCTAGTAGACGCCGGCAAGGTGAGAGCGTTCTGTACTGGGAGAAAGCTCCGAAACAATCTTGGGTTTCCAATCCACAGAGTCTTCGTCTCACCTTTCCTCCGCTGCATCCAAACCGCTTCGGAGGTCGTCTCCTCTCTCTGCGCCGTCAACGATAGCCCGGATCAGATGACCTCTGATAACGTCTCCATCGATCCCTCCAAGCTCAAGGTGTCAATTGAGTACGGATTGTGTGAGGTCTTAAGTAGGGAAGCCATAAGACCAGATTTGGCTCCTAAAAACGGAAAATGGGGTTTCAATACCTCTGAGCTTGAAGCTATGTTACCAACTGGGACAGTGGATCAATCAGTGGAACGTTTATACAAAGAGTTGCCACAGTGGGAGGAGTCAGTGATGGATGCAAGGGCTAGATATGCAAGGGTTATTCGGGCACTTGCAGATAAATTTCCTTCCGAAAACTTGTTACTTGTCACGCACGGAGAAGGAGTTGGGGTCGCAGTTTCTGCATTCATGAAGGACACAACTGTGTATGAAGTAGAATATTGTGCATATTCACATGCACAGAGACAAATCTCCTTTAGCCCTAGCTCGGCATTTACTGCCGGAAATTTTGAGGTCGTTACGAATAATGGCCAATCGGGTATCCGCTACTGCTCTGAAAGCGATATAGCCCTTGATGTATGA 822 49.27 MESSSVAVDHHHNNQFQQNVVVMRHGDRIDSAEPLWILTAARPWDPPLVDAGKVRAFCTGRKLRNNLGFPIHRVFVSPFLRCIQTASEVVSSLCAVNDSPDQMTSDNVSIDPSKLKVSIEYGLCEVLSREAIRPDLAPKNGKWGFNTSELEAMLPTGTVDQSVERLYKELPQWEESVMDARARYARVIRALADKFPSENLLLVTHGEGVGVAVSAFMKDTTVYEVEYCAYSHAQRQISFSPSSAFTAGNFEVVTNNGQSGIRYCSESDIALDV 273
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01053 273 PIRSF PRIB5 4 272 IPR012398 -
Eupl14g01053 273 CDD HP 20 86 - -
Eupl14g01053 273 PANTHER UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED 19 265 IPR051710 -
Eupl14g01053 273 SUPERFAMILY Phosphoglycerate mutase-like 19 219 IPR029033 -
Eupl14g01053 273 Gene3D - 15 238 IPR029033 -
Eupl14g01053 273 FunFam Phosphoglycerate mutase family protein 16 239 - -
Eupl14g01053 273 Pfam Histidine phosphatase superfamily (branch 1) 158 217 IPR013078 -
Eupl14g01053 273 Pfam Histidine phosphatase superfamily (branch 1) 21 90 IPR013078 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01053 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:17715659 Eupl14g01329 Eupl-Chr14:30831310 wgd