Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01056 | ATGACGAGGAGGTGCTCGCATTGCAGTCACAATGGGCACAATTCGAGAACTTGCCCTAACAGAGGGGTCAAGCTCTTCGGGGTCAGGCTAACGGATGGGTCGATCAGGAAGAGTGCGAGTATGGGGAATCTAACTCACTACACCGGATCAAATAACGGGAATCACCATAATAATAGCAACAACAATCCTGGTTCGCCGGGTGAGACTCCGGACCACGGTGCGCCCGCAGATGGTTACGCTTCGGAGGATTTCGTCCAGGGCTCGTCTTCAAGTTGCCGCGAGCGAAAGAAAGGTGTGCCGTGGACTGAAGAGGAACACAGAATGTTTCTTCTTGGTTTGCAGAAGCTCGGCAAAGGTGATTGGCGTGGTATAGCACGCAATTATGTAATATCAAGGACCCCCACTCAGGTGGCCAGCCATGCTCAGAAATATTTCATCCGGCAAAGCCATGTGTCCAGGAGAAAAAGACGGTCCAGCCTGTTTGATATCATAGCAGATGAATCAGTCGACACTCCTCAAGTTGTATCACAGGAATTGTTTCCTATCAGCCATCCACAAGCTCAAACACAAAGCAACAATCCATTGCCAGCTCCACCAGCTCTGGATGAAGAATGTGAATCGATGGATTCTGCCAACTCCAATGATGGAGAAGCTGCCCTTCCAACACCAGAGAGTTCACAGTGCAATTACCCAGTAATATTTCCTGCTTATTTCTCACCGTTCTTTCCATTTTCCTTCCCATTTTGGCCGGGATACACTACTGAGCCTACGACGAAAGAGGCACATGAAGTAGTTAAGCCAACAGCAATACATTCAAAGAGTCCCATCAATGTTGATGAGCTGGTGGGCATGTCAAAACTGAGCCTAGGAGAATCTCTTGGTCACTCAGGGCCTTCATCTCTCTCTCTAAAATTGCTCGAAGGTTCCAGTAGGCAGTCAGCTTTCCATGCTAACCCAACAACAGACAGCTCAAGCATGAACTCAAGCAGCAGTCCAATTCATGCAGTCTAG | 1011 | 48.66 | MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYTGSNNGNHHNNSNNNPGSPGETPDHGAPADGYASEDFVQGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSHVSRRKRRSSLFDIIADESVDTPQVVSQELFPISHPQAQTQSNNPLPAPPALDEECESMDSANSNDGEAALPTPESSQCNYPVIFPAYFSPFFPFSFPFWPGYTTEPTTKEAHEVVKPTAIHSKSPINVDELVGMSKLSLGESLGHSGPSSLSLKLLEGSSRQSAFHANPTTDSSSMNSSSSPIHAV | 336 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01056 | 336 | Pfam | Myb-like DNA-binding domain | 99 | 145 | IPR001005 | - | |
| Eupl14g01056 | 336 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 96 | 148 | IPR006447 | GO:0003677(InterPro) | |
| Eupl14g01056 | 336 | Gene3D | - | 99 | 151 | - | - | |
| Eupl14g01056 | 336 | MobiDBLite | consensus disorder prediction | 37 | 99 | - | - | |
| Eupl14g01056 | 336 | MobiDBLite | consensus disorder prediction | 37 | 67 | - | - | |
| Eupl14g01056 | 336 | SUPERFAMILY | Homeodomain-like | 95 | 150 | IPR009057 | - | |
| Eupl14g01056 | 336 | SMART | sant | 97 | 147 | IPR001005 | - | |
| Eupl14g01056 | 336 | FunFam | transcription factor MYB1R1 | 99 | 150 | - | - | |
| Eupl14g01056 | 336 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 93 | 149 | IPR017930 | - | |
| Eupl14g01056 | 336 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 1 | 285 | IPR052245 | GO:0009723(PANTHER)|GO:0009739(PANTHER) | |
| Eupl14g01056 | 336 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Eupl14g01056 | 336 | ProSiteProfiles | SANT domain profile. | 101 | 149 | IPR017884 | - | |
| Eupl14g01056 | 336 | MobiDBLite | consensus disorder prediction | 184 | 224 | - | - | |
| Eupl14g01056 | 336 | MobiDBLite | consensus disorder prediction | 312 | 336 | - | - | |
| Eupl14g01056 | 336 | CDD | SANT | 100 | 145 | IPR001005 | - | |
| Eupl14g01056 | 336 | ProSiteProfiles | Myb-like domain profile. | 93 | 145 | IPR001005 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01056 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:17964566 | Eupl8g00784 | Eupl-Chr8:21953250 | dispersed | |
| Eupl | Eupl-Chr14:17964566 | Eupl14g01325 | Eupl-Chr14:30639140 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Eupl | Myb_DNA-binding | 1.9e-11 | CL0123 | TF | MYB-related |