AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01060 ATGCCTGATGCGAAATGGAGATATGTAATAGATGATTTTGCTGCTTCCTTTGGTATAGCAAGGCACTCACTACTGGAATCTTTAACTTTCTATCTTCTCGATGACCACACTGATCAGGCTCTAGAGGAAGCTTGTCACCTTCTCCCAGAAATTGCAGGCCCAGCAACACATCCGAAGATTGCACAAGTTCTGTTAGAAAGGCAAAATCCTGATGCAGCTCTTATGGTTTTACGTTGGTCCGGACGTGATGGATTATGTGCATATGCAAATTCTGAGCATGGTGGTGCACAATTGGTTTCTCTTGGTGAGGCTGTTACAGCGGTTCGGGTGAGAGTTGAGTGTGGGCTCTTGACTGAAGCCTTTATGTACCAGAGGACACACTGCCTGAAAGTGAAGGAAGAGAAATTGAAGCATGGATCTTTCCAGGTCTTTTCAAATGATTTAAAAGGTGAACAAGAGACTTGGGTGGACCGAATGGAGGCTTTGGTGACTGAAATTTGTTGTCTATGCATTCGGAGAAACTTGGTAGATCGAATAATAGAGTTACCATGGAATTCTGATGAGGAGAAATATCTCCACAAGTGCCTGTTTGATTATGCTATTGAAGACCCTTCGACAAAAACTGGTAGCCTTCTTGTTGTGTTTTATCTTCAGCGGTTTCGATATATTGAGGCATACCAAGTTGATCGCAAACTTCAGAGCTTGGAACAGGAATTCATTGCAAAGACTTCTATCAGCAGCGAGGAAGTTGTATCCAGGATAAGATCAACAAGTCAGTGGAGAACAGGATTGGTTGATAAATGCATCGAGTTGCTGCCCGAGGTACAACAGCAACAAGTAAAGACTGGAAGCTATCCTGATATTGGTTTTTCTCCTACTAAGGAAGTTGAAGTTCTTCCAAAATCTGATCTGTCTGATGTACGACCAAATTCCACCGGTTTACTGGTTCTCTCATCCACTGATTCTTCCCTTCTTCTTCCAATAAATTCTGCAATTCCCCCTAAGAAGAAGACTTCAACTTTCAATACCCCTGCCAAACTTGGTGCATCTGTAAACAATTCCCATATTGAACTTGGTAACTATCACTCTCCATCTATTCTTCATGGGAGGTTTCTCACCCCTGTTGGAGGTCCATCTAGTCTCCACGGGGACAATTTGGTCTCAAAGTACATTACTACCAGAGAAACGAGGCATCAAATTAGCACCAAGCCAAACTTCAAATTTGATGATGTCCCGACTCCTGGAATTCATCTCCTCAGCCCTCAGAGTAGTACACTGCTTAAAGAAGTGAACAGAAGTTCATCAAAGGTCCTTCACAATGATCACCTTAGAGATGACCAATATGATAAAGTCTCACCAGGACTGCAACCAAATGGGCTCACTAACTATGCAGAAAATACCCGTCCTCTGTTTGCTGGCAGAGTCTCTGTCGATCAGATAAGTACACCTGGGAGTAATCATGGATTGTTAAGAGATTTTGTTCAAGATCCGAACCCAATTGTGTCAGGTAAACGGATCCCCTCAGATAGACCTTGGACGGCAATTACTGCAGATGACTCAATGGATTTCTCTTGGAAAGAAACTGCAGTCGTGGACATGAACATGAATGGTGCTCCAAGATGGAGGTCCGATGAAACCAGTGAAGATGAAGAGGAGCCTAGTCCAGAGAGGATTATTGGTGGAGCATCCTTTGTGACTCCCATGGGAGGAACAAGAAGAAGCAGAATGCTGAAGTTTCTCCGTCTTCATGGGAGAGCATCAACTGATCCTCATGGGAATTTGAAGATATTACAGAGAGGAGGGATGCTTGTTGCAAAGGGGAATGTGGTTGTACGATTCTGTATTTTATCCAAGTTTATTCCTCTGAGTTTTGGTGATTGCTTATCCATGTTGGTAGTGACATCTGCTGTACATGTGGAACAAATACAGTTGAAACTTACTATATCTTCTAAGTATGTATGA 1962 42.92 MPDAKWRYVIDDFAASFGIARHSLLESLTFYLLDDHTDQALEEACHLLPEIAGPATHPKIAQVLLERQNPDAALMVLRWSGRDGLCAYANSEHGGAQLVSLGEAVTAVRVRVECGLLTEAFMYQRTHCLKVKEEKLKHGSFQVFSNDLKGEQETWVDRMEALVTEICCLCIRRNLVDRIIELPWNSDEEKYLHKCLFDYAIEDPSTKTGSLLVVFYLQRFRYIEAYQVDRKLQSLEQEFIAKTSISSEEVVSRIRSTSQWRTGLVDKCIELLPEVQQQQVKTGSYPDIGFSPTKEVEVLPKSDLSDVRPNSTGLLVLSSTDSSLLLPINSAIPPKKKTSTFNTPAKLGASVNNSHIELGNYHSPSILHGRFLTPVGGPSSLHGDNLVSKYITTRETRHQISTKPNFKFDDVPTPGIHLLSPQSSTLLKEVNRSSSKVLHNDHLRDDQYDKVSPGLQPNGLTNYAENTRPLFAGRVSVDQISTPGSNHGLLRDFVQDPNPIVSGKRIPSDRPWTAITADDSMDFSWKETAVVDMNMNGAPRWRSDETSEDEEEPSPERIIGGASFVTPMGGTRRSRMLKFLRLHGRASTDPHGNLKILQRGGMLVAKGNVVVRFCILSKFIPLSFGDCLSMLVVTSAVHVEQIQLKLTISSKYV 653
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01060 653 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HOS1 1 576 IPR044718 GO:0004842(InterPro)|GO:0016567(InterPro)
Eupl14g01060 653 MobiDBLite consensus disorder prediction 537 563 - -
Eupl14g01060 653 Pfam Nuclear pore complex assembly 5 197 IPR025151 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01060 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:18125549 Eupl14g01322 Eupl-Chr14:30570014 dispersed
Eupl Eupl-Chr14:18125549 Eupl14g01320 Eupl-Chr14:30432855 wgd