AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01076 ATGAAGAAGGGCAAAGGAGTGGCAATTTCTTCAAACCCTCCGAGCGGTGGCGAAGACTTAGATGAGAAGGGGGACTTCTCCCTGCCCACGACCAGATTGGCTACTCGAAATGCTTCTTCTAAATACGATTTTGTCAAGGTGAAGGTGTGGTTGGGAGATAATGCGGATCACTATTATGTTCTATCCAGATTTCTCCTTAGCAGAATGTTAACTGTCACTAAGATCCCTAATCATGTCGCCATTAAAATAGCTCTGGAACTCAAGAAGCTTCTTATAGACAACAGCCTCTTAGATGTCTCTCAATCTGATTTGGAAGTTAATCTGTTTAAGCTTATGGAACGGCGGGGCTATGGGCAAGAGTATATAAATCGTTACAAGATGATGACAAGATTTCACCACCAAAGAGTACCACTGGTAATTCTTGTATGTGGAACTGCCTGTGCTGGCAAGTCCACCATTGCCACCCAACTTGCACAACGGCTCAACTTGCCGAATGTTTTACAGACAGATATGGTCTATGAATTGCTACGCACATCAACAGAAGCACCATTGGCATCTACTCCAGTGTGGGCACGAGACTTCAGCTCCTCTGAGGAACTTGTTACTGAATTCTGTAGAGAATGTAGAATTGTTCGTAAAGGTTTGGCTGGGGATTTGAAGAAGGCAATGAAAGATGGGAAACCTATTATAATTGAGGGAATACATTTGGATCCAAGTATTTATTTAATGGATGATGAGAATAGAGAACTGACCATCATGGCTACAAAAACTGAAGAGCCAAAACCTGTTTCTGTGACCTCAGAGGATAATATTGCAATACAACAGGAATGTAGTTCAAAAAGTACTTGCGGAAATGACACTGGGAGTAACGATTGCTGTCCTGGGACCGCGATCCCAGAAGTGGGGATATCTGCTGAGCAGGTGACTGAAGTTTCAGATTGTCTGGAATCTATTGACCTATCAGGAAGTGTTTCTGAGGATCAAGGTGAAGCTCTTAAGGATCCAGAAAAGAATACAAGCCCTCCTAAGAAGAAAGAAAAGTCTTCTGCTGAACCAATAATTGTGCCTATAGTTTTGAAGATGGCCGAGTTTGATCACAAGGCATTACTAGAGGAGTGGATCTCCAGTAGGACATTTGGCGATAAATGTCTAGCCCAGGATCATGATAAGCTAATAAGCAACTTAAAGACGATTCAGGATTATCTTTGCTCGTTTGAATCACAGGGTTTGACTGTTGTCAATATTTCAGCAACAACATTCCCACAAACACTGGATTGGCTGCACAACTATCTTCTTCAGTGTATTGAGCGAGGTATTTCTTCTGTGTCCACTGAACCCGGGAAGCAACCGGATGCAAACTAG 1362 42.73 MKKGKGVAISSNPPSGGEDLDEKGDFSLPTTRLATRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEVNLFKLMERRGYGQEYINRYKMMTRFHHQRVPLVILVCGTACAGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTEAPLASTPVWARDFSSSEELVTEFCRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDENRELTIMATKTEEPKPVSVTSEDNIAIQQECSSKSTCGNDTGSNDCCPGTAIPEVGISAEQVTEVSDCLESIDLSGSVSEDQGEALKDPEKNTSPPKKKEKSSAEPIIVPIVLKMAEFDHKALLEEWISSRTFGDKCLAQDHDKLISNLKTIQDYLCSFESQGLTVVNISATTFPQTLDWLHNYLLQCIERGISSVSTEPGKQPDAN 453
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01076 453 MobiDBLite consensus disorder prediction 1 24 - -
Eupl14g01076 453 MobiDBLite consensus disorder prediction 325 349 - -
Eupl14g01076 453 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 35 438 - -
Eupl14g01076 453 Pfam AAA domain 140 247 - -
Eupl14g01076 453 MobiDBLite consensus disorder prediction 329 349 - -
Eupl14g01076 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 243 IPR027417 -
Eupl14g01076 453 Gene3D - 139 274 IPR027417 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01076 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:14588540 Eupl14g01076 Eupl-Chr14:18681085 wgd