Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01083 | ATGCTTCATACTTTAGCTTCTTCTTCGTCTCCTTCTCTCGTCCTTATCATCTCCTCTTCCTCTCGCTTCTCTCCTCGCTCTTCCTCTCTCCTCCAACTCGGCAGAATCCAAATAAATCTCTCAACATTTCCTCGAAATTCCAGACCCATGTCCCTGTTCACAAGCCCCATGAACTGGTTAGGAAAACTAGGGTTAGGGTTCGGTAACAAAGCTTCTGAAATCTCCATGGATTCATCTTCTTCTTCATCGATTGCTCAGGGTCCTGACGAAGATATTCCTGCTCCGGGGCAGCAGTTCGCTCAGTTCGGCGCCGGATGCTTTTGGGGCGTTGAATTAGCGTTCCAGAGAGTCCCGGGAGTTTCTAAGACGGAGGTTGGGTACAGTCAAGGGTTTCTGCACAATCCCACGTACAATGATGTTTGTTCGGGCACAACGAATCATTCGGAGGTCATTAGGGTTCAATACGATCCCAAGGAGTGCAGTTTTGAGAATTTGCTCGATTTGTTTTGGGCCCGACACGATCCAACCGCTCTTAATCGTCAGGGAAATGATGTGGGTACACAATACAGATCTGGAATATACTTCTACACACCTGAGCAGGAGAAAGAAGCACGGGAGAGTCTGGAGCGGCAGCAGAAGCTCTTGAACAGGAAGATTGTTACTGAGATTCTTCCTGCGAAGAAGTTCTACAGAGCGGAAGAATACCACCAGCAATATCTTGCAAAAGGGGGCCGCTTCGGTTTCAAGCAGTCAGCTGATAAAGGCTGCAATGATCCAATCCGATGCTATGGCTGA | 795 | 48.3 | MLHTLASSSSPSLVLIISSSSRFSPRSSSLLQLGRIQINLSTFPRNSRPMSLFTSPMNWLGKLGLGFGNKASEISMDSSSSSSIAQGPDEDIPAPGQQFAQFGAGCFWGVELAFQRVPGVSKTEVGYSQGFLHNPTYNDVCSGTTNHSEVIRVQYDPKECSFENLLDLFWARHDPTALNRQGNDVGTQYRSGIYFYTPEQEKEARESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSADKGCNDPIRCYG | 264 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01083 | 264 | Hamap | Peptide methionine sulfoxide reductase MsrA [msrA]. | 97 | 254 | IPR002569 | GO:0008113(InterPro) | |
| Eupl14g01083 | 264 | SUPERFAMILY | Peptide methionine sulfoxide reductase | 92 | 251 | IPR036509 | GO:0008113(InterPro) | |
| Eupl14g01083 | 264 | Gene3D | Peptide methionine sulphoxide reductase MsrA | 82 | 264 | IPR036509 | GO:0008113(InterPro) | |
| Eupl14g01083 | 264 | FunFam | Peptide methionine sulfoxide reductase | 87 | 264 | - | - | |
| Eupl14g01083 | 264 | PANTHER | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE | 80 | 262 | IPR050162 | GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER) | |
| Eupl14g01083 | 264 | Pfam | Peptide methionine sulfoxide reductase | 100 | 242 | IPR002569 | GO:0008113(InterPro) | |
| Eupl14g01083 | 264 | NCBIfam | peptide-methionine (S)-S-oxide reductase MsrA | 100 | 242 | IPR002569 | GO:0008113(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01083 | K07304 | peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr11:4318451 | Eupl14g01083 | Eupl-Chr14:19268106 | transposed | |
| Eupl | Eupl-Chr14:19268106 | Eupl14g01142 | Eupl-Chr14:23101432 | wgd |