AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01088 ATGACTGGGATTCCCAATCTTCTGAATTCGGTAGATTGGTATACACTTTCACCAATTTCTGGTGTTGCATATCCTGAGTTAGTCAGGATGTTCTATTGTAATTTGAACAATCATGATCCAGACGGTCCATGTCTTTATTCTAAGGTCCGAGGTGTTAGGTTTAAAATTACATTATCTTTGATCTCAAAGATAACAGGTCTTCCTCGAGTACCTAATGGAGGAATTTTTCCCCCTTCCTTACCTCTCAAGAACAAAAAGGCTATTTCAAGAGCCATTTGTGCGAAGGTAGTTCATCGGACATCTGATTTGGCTACTAGGGAATTACTTCCCATGTATCATTTTCTAAGGTTGATCTTCTCCTACAACTTGGTCCCAAAGGCGGGACATCGGAGTGAGATTGGACCCTATATCCAGTATCTTCTGTATTGTGTCTCTCAGGGCACGAGAATCTGTGGTCCTTCAGTGATTTTTCATCTCATGGTTGAGAATTTGGCGATTGAGAATCGCAAGCGGTCTTTGCCTTTTGACATTTTAGTTTCAAAAATTCTGAGTCATTACAAAGTTCCTATTCTAGACTCTAATGAAACTTTGTATCCCATCTCACCCATCAATCAAGCTACTTTTAGCAAGATGTTGGTTGGTGAATCGTCTATGTCTGCTCCTACTTCTGTTTCTGCTTCGAGTTCTAGATCCTGTCGTTCCTCTGTATCTGCATCTATTGCAGAGTCTTCACCTGAGGAGACGACTGTGCCTTCAGCAGCTGGCGATGATGAAGATGAAGATGAAGTCGAAGATGAAGATGAAGACAAAGATGAAGAAGAAGAAGAAGATGATGCAGATGACGATGATGGTAATGACAATGTCGACGATGATGACTATGACTAG 885 41.13 MTGIPNLLNSVDWYTLSPISGVAYPELVRMFYCNLNNHDPDGPCLYSKVRGVRFKITLSLISKITGLPRVPNGGIFPPSLPLKNKKAISRAICAKVVHRTSDLATRELLPMYHFLRLIFSYNLVPKAGHRSEIGPYIQYLLYCVSQGTRICGPSVIFHLMVENLAIENRKRSLPFDILVSKILSHYKVPILDSNETLYPISPINQATFSKMLVGESSMSAPTSVSASSSRSCRSSVSASIAESSPEETTVPSAAGDDEDEDEVEDEDEDKDEEEEEDDADDDDGNDNVDDDDYD 294
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01088 294 MobiDBLite consensus disorder prediction 219 294 - -
Eupl14g01088 294 PANTHER AGL056WP 184 292 - -
Eupl14g01088 294 MobiDBLite consensus disorder prediction 252 294 - -
Eupl14g01088 294 SUPERFAMILY ARM repeat 250 292 IPR016024 -
Eupl14g01088 294 Coils Coil 256 276 - -
Eupl14g01088 294 Pfam Putative plant transposon protein 19 189 IPR046796 -
Eupl14g01088 294 MobiDBLite consensus disorder prediction 219 250 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01088 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:19635231 Eupl6g01856 Eupl-Chr6:41324968 dispersed