AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01105 ATGGTCGTCAAAAGTCTGATTAAGAGATGGGGAGCCAAGGTGATAATGCTTCAAGAGACCAAATTGGAAAAGGTGGATGGGGGTGTCATTAAGGAGATTTGTGGCCATGGGGACTTTGGGTGGCATGAATTAGCAGTTGTTGGAACTGTAGGGGGCATTATTATCATATGGGACAGGAGGGTTCTAGAGGTGGACGACGTTCTAATAGGAGCTTTCTCAGTCTCCATTAGATGTAGAGGTGTGGAGGAACAATTGTGGTTGATTCTGATGGGGGTTTATGGCCCTTCAGACAGCAAGGGTAGACATCAATTTTGGAAAGAGATGGAAGACATAGCAGGTCTTTGGTACGATCCGTGGTGCATTGGAGGAGATTTCAATGTTGTTCGCTTTCCTCATGAGAAGAATGTAGGAGGGAGGTTAACTAGGTGCATGAAAGAATTTGGGGAGTTTATAAACATGCAGGCCCTCATGGATCTTCCCTTGGGAGGAGCTAAATATACTTGGTCTAACAACCAAGCCAGGCCGACCTTATGCAAGTTGGATAGGGTCCTTGTATCCCATAGTTGGGAAGACCACTTCCATGAGGTTTCTTTGGTGGCGATCCCTAAACCGGCTTCAAACCACACTCCCTTGCTGTTAGGTTGTGGGGGATTTAGATCGAGACCATCTCCTTTCCGTTTTGAAAATATGTGGCTGCATAATCCACATTTTAAGGCTAAAGTGGAGGAGTGGTGGAGTTCCTTTTCTTTCGATGGAAAGGCGGGGGTGGCCTTTAGATGCAAGCTCAAGGCGCTTAAAGAAAGGATCAAATCTTGGAACCGGGAGACATTTGGCCGTGTCGATCACAAAAGGGCCTGGTCTTAG 864 46.64 MVVKSLIKRWGAKVIMLQETKLEKVDGGVIKEICGHGDFGWHELAVVGTVGGIIIIWDRRVLEVDDVLIGAFSVSIRCRGVEEQLWLILMGVYGPSDSKGRHQFWKEMEDIAGLWYDPWCIGGDFNVVRFPHEKNVGGRLTRCMKEFGEFINMQALMDLPLGGAKYTWSNNQARPTLCKLDRVLVSHSWEDHFHEVSLVAIPKPASNHTPLLLGCGGFRSRPSPFRFENMWLHNPHFKAKVEEWWSSFSFDGKAGVAFRCKLKALKERIKSWNRETFGRVDHKRAWS 287
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01105 287 Gene3D Endonuclease-exonuclease-phosphatase 2 214 IPR036691 -
Eupl14g01105 287 PANTHER BNAC02G09200D PROTEIN 81 278 - -
Eupl14g01105 287 SUPERFAMILY DNase I-like 4 212 IPR036691 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01105 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:20711254 Eupl3g00237 Eupl-Chr3:7581956 dispersed
Eupl Eupl-Chr13:26292064 Eupl14g01105 Eupl-Chr14:20711254 transposed
Eupl Eupl-Chr4:20946867 Eupl14g01105 Eupl-Chr14:20711254 transposed
Eupl Eupl-Chr14:20711254 Eupl4g01866 Eupl-Chr4:42189422 wgd