AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01111 ATGGTCCTTGTTCAAGACTTCAATTGTGCATTCCAGGAGAGTATCCTTCTCCAGGGTCATATGTACTTGTTTGTTCGTCATATTTGCTTTTATTCCAACATATTTGGATTTGAGACAAAGAAAATAATCCCCTTCCATGAAGTTACATGTGTACGGAAAGCAAAGACAGCAGCAATCTTCCCAAATGCCATAGAAATTGTGTCGGGGGGAAAAAAGCACTTCTTTGCGTCATTCTTGTCCCGTGATGAAGCTTACCGGCTCATAGTTGATGGATGGTCACAACTTAGTAATGACGCTAAAGCCATCATAGATTTTCAGGACTCAAAATCTGAGACCAGCAGCCAGGACAATGGACTTGTTATATTTGAAAAATCCAAGTGCTTCAAACAACCACCTAATGACATGTATTCTGTGGACAGGAAAAAAGATGCGCATCCTTCAGGAGAATGTACACCTCTATCAAATGGTGAGGTTGACGCTAATGTTTCAACGAGATTTTCAGAATCACAAGAAAATGGAGAAGAAGATGCAGAACCGGTTGTGAATGGCGAGTGTTTGACTTCTGGAGAGCGTTTTAGGTGGAAGCTCGAGGATGCTGATGCCCCTAAAGTACCTGAATATTATACAAAGGTTGCTGAAGCAAAGTTTCTGATTCAGGTAGAGGAGTTCTTCAGTTTCTTTTTCGCAGATGATGCTGTTAAATTTATTGAAACGTTTCATAGAAGATGTGGAGACAAAGATTTTACGTGCACTTCTTGGTATGAGCATGAGCAATTTGGCTATGCCCGTGATGTGTCATTTCAGCATCCGATCAAAATATATTTTGGTGCAAAATTTGGCAACTGTCAGGAGGTCCAGAAATTTCGAGTTTTCAGAAACAGCCATTTGGTTATTGAGACGTCACAGGAAGTTAGTGATGTACCGTATGGGGATTATTTTCGTGTTGAGGGACTTTGGGATGTGGAGAGAGATGGTAATGAGGCAAATAATTGTTGCATTTTGCGGGTATATGTAAATGTGGCATTTTCTAAGAAAACCATGTGGAAAGGGAAAATAGAGCAGTCCACAGTTGAAGAGTGCCGAGAAGCTTATTCAATTTGGCTAAACTATGCACATGAATTGTTGAAGCAGAACCTTGCAAAACTGGAAGGGGAAAATCCTGCTGCTAACATGATTCAAAATGATGATGTTCGATTGGAAAGGCATACGAAAACTGAGGGACCTTCGGAAAGGTTACATGATACAACTAATCATCCGAAGCTCCCACAGGTGACATCTGATTCTGAGGATGTTAATCCACGGTTTAAGAATCCCATGCAAGGAGACTTGAGTGATGAAACCTCCACTACATCTTTATTCAGAGAATCATTGGCGAGATTTTGTTTGTGTTTGAAAAGTCAAAATCACCTTCCTCTAATTTTGGCTGCCACCTTTGTCTTGATCCTTCTTCTAATGCAGTTTAGCATAATTGTGCTATTAACTAGAGCCCCACAAGTCCATCTGATTTCTCAAGCGGACTATATGAATGGTATCGGAAGTGGCGGAGATAGAGCAGAGGCTGTAGCTTGGTTGGAGAAGCGGTTTCACCACCTCCAGGATGAAATGTTCATGGTAGAGGCTCGGCTGGAGAAAATGCGGCATGAGTATGCACTGTTGAAAGGTCATCTGAATGGCCTTCAACAAGTCAGAAAGCCAAGACAATAA 1704 41.37 MVLVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKIIPFHEVTCVRKAKTAAIFPNAIEIVSGGKKHFFASFLSRDEAYRLIVDGWSQLSNDAKAIIDFQDSKSETSSQDNGLVIFEKSKCFKQPPNDMYSVDRKKDAHPSGECTPLSNGEVDANVSTRFSESQENGEEDAEPVVNGECLTSGERFRWKLEDADAPKVPEYYTKVAEAKFLIQVEEFFSFFFADDAVKFIETFHRRCGDKDFTCTSWYEHEQFGYARDVSFQHPIKIYFGAKFGNCQEVQKFRVFRNSHLVIETSQEVSDVPYGDYFRVEGLWDVERDGNEANNCCILRVYVNVAFSKKTMWKGKIEQSTVEECREAYSIWLNYAHELLKQNLAKLEGENPAANMIQNDDVRLERHTKTEGPSERLHDTTNHPKLPQVTSDSEDVNPRFKNPMQGDLSDETSTTSLFRESLARFCLCLKSQNHLPLILAATFVLILLLMQFSIIVLLTRAPQVHLISQADYMNGIGSGGDRAEAVAWLEKRFHHLQDEMFMVEARLEKMRHEYALLKGHLNGLQQVRKPRQ 567
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01111 567 ProSiteProfiles VASt domain profile. 207 379 IPR031968 -
Eupl14g01111 567 MobiDBLite consensus disorder prediction 398 447 - -
Eupl14g01111 567 Pfam GRAM domain 3 95 IPR004182 -
Eupl14g01111 567 MobiDBLite consensus disorder prediction 398 417 - -
Eupl14g01111 567 SMART gram2001c 2 55 IPR004182 -
Eupl14g01111 567 CDD PH-GRAM-GRAMDC 3 92 - -
Eupl14g01111 567 Gene3D - 1 94 IPR011993 -
Eupl14g01111 567 Pfam VAD1 Analog of StAR-related lipid transfer domain 211 358 IPR031968 -
Eupl14g01111 567 MobiDBLite consensus disorder prediction 138 157 - -
Eupl14g01111 567 MobiDBLite consensus disorder prediction 418 433 - -
Eupl14g01111 567 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 2 560 - GO:0043069(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01111 K27900 vascular associated death 1, chloroplastic