Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01111 | ATGGTCCTTGTTCAAGACTTCAATTGTGCATTCCAGGAGAGTATCCTTCTCCAGGGTCATATGTACTTGTTTGTTCGTCATATTTGCTTTTATTCCAACATATTTGGATTTGAGACAAAGAAAATAATCCCCTTCCATGAAGTTACATGTGTACGGAAAGCAAAGACAGCAGCAATCTTCCCAAATGCCATAGAAATTGTGTCGGGGGGAAAAAAGCACTTCTTTGCGTCATTCTTGTCCCGTGATGAAGCTTACCGGCTCATAGTTGATGGATGGTCACAACTTAGTAATGACGCTAAAGCCATCATAGATTTTCAGGACTCAAAATCTGAGACCAGCAGCCAGGACAATGGACTTGTTATATTTGAAAAATCCAAGTGCTTCAAACAACCACCTAATGACATGTATTCTGTGGACAGGAAAAAAGATGCGCATCCTTCAGGAGAATGTACACCTCTATCAAATGGTGAGGTTGACGCTAATGTTTCAACGAGATTTTCAGAATCACAAGAAAATGGAGAAGAAGATGCAGAACCGGTTGTGAATGGCGAGTGTTTGACTTCTGGAGAGCGTTTTAGGTGGAAGCTCGAGGATGCTGATGCCCCTAAAGTACCTGAATATTATACAAAGGTTGCTGAAGCAAAGTTTCTGATTCAGGTAGAGGAGTTCTTCAGTTTCTTTTTCGCAGATGATGCTGTTAAATTTATTGAAACGTTTCATAGAAGATGTGGAGACAAAGATTTTACGTGCACTTCTTGGTATGAGCATGAGCAATTTGGCTATGCCCGTGATGTGTCATTTCAGCATCCGATCAAAATATATTTTGGTGCAAAATTTGGCAACTGTCAGGAGGTCCAGAAATTTCGAGTTTTCAGAAACAGCCATTTGGTTATTGAGACGTCACAGGAAGTTAGTGATGTACCGTATGGGGATTATTTTCGTGTTGAGGGACTTTGGGATGTGGAGAGAGATGGTAATGAGGCAAATAATTGTTGCATTTTGCGGGTATATGTAAATGTGGCATTTTCTAAGAAAACCATGTGGAAAGGGAAAATAGAGCAGTCCACAGTTGAAGAGTGCCGAGAAGCTTATTCAATTTGGCTAAACTATGCACATGAATTGTTGAAGCAGAACCTTGCAAAACTGGAAGGGGAAAATCCTGCTGCTAACATGATTCAAAATGATGATGTTCGATTGGAAAGGCATACGAAAACTGAGGGACCTTCGGAAAGGTTACATGATACAACTAATCATCCGAAGCTCCCACAGGTGACATCTGATTCTGAGGATGTTAATCCACGGTTTAAGAATCCCATGCAAGGAGACTTGAGTGATGAAACCTCCACTACATCTTTATTCAGAGAATCATTGGCGAGATTTTGTTTGTGTTTGAAAAGTCAAAATCACCTTCCTCTAATTTTGGCTGCCACCTTTGTCTTGATCCTTCTTCTAATGCAGTTTAGCATAATTGTGCTATTAACTAGAGCCCCACAAGTCCATCTGATTTCTCAAGCGGACTATATGAATGGTATCGGAAGTGGCGGAGATAGAGCAGAGGCTGTAGCTTGGTTGGAGAAGCGGTTTCACCACCTCCAGGATGAAATGTTCATGGTAGAGGCTCGGCTGGAGAAAATGCGGCATGAGTATGCACTGTTGAAAGGTCATCTGAATGGCCTTCAACAAGTCAGAAAGCCAAGACAATAA | 1704 | 41.37 | MVLVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKIIPFHEVTCVRKAKTAAIFPNAIEIVSGGKKHFFASFLSRDEAYRLIVDGWSQLSNDAKAIIDFQDSKSETSSQDNGLVIFEKSKCFKQPPNDMYSVDRKKDAHPSGECTPLSNGEVDANVSTRFSESQENGEEDAEPVVNGECLTSGERFRWKLEDADAPKVPEYYTKVAEAKFLIQVEEFFSFFFADDAVKFIETFHRRCGDKDFTCTSWYEHEQFGYARDVSFQHPIKIYFGAKFGNCQEVQKFRVFRNSHLVIETSQEVSDVPYGDYFRVEGLWDVERDGNEANNCCILRVYVNVAFSKKTMWKGKIEQSTVEECREAYSIWLNYAHELLKQNLAKLEGENPAANMIQNDDVRLERHTKTEGPSERLHDTTNHPKLPQVTSDSEDVNPRFKNPMQGDLSDETSTTSLFRESLARFCLCLKSQNHLPLILAATFVLILLLMQFSIIVLLTRAPQVHLISQADYMNGIGSGGDRAEAVAWLEKRFHHLQDEMFMVEARLEKMRHEYALLKGHLNGLQQVRKPRQ | 567 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01111 | 567 | ProSiteProfiles | VASt domain profile. | 207 | 379 | IPR031968 | - | |
| Eupl14g01111 | 567 | MobiDBLite | consensus disorder prediction | 398 | 447 | - | - | |
| Eupl14g01111 | 567 | Pfam | GRAM domain | 3 | 95 | IPR004182 | - | |
| Eupl14g01111 | 567 | MobiDBLite | consensus disorder prediction | 398 | 417 | - | - | |
| Eupl14g01111 | 567 | SMART | gram2001c | 2 | 55 | IPR004182 | - | |
| Eupl14g01111 | 567 | CDD | PH-GRAM-GRAMDC | 3 | 92 | - | - | |
| Eupl14g01111 | 567 | Gene3D | - | 1 | 94 | IPR011993 | - | |
| Eupl14g01111 | 567 | Pfam | VAD1 Analog of StAR-related lipid transfer domain | 211 | 358 | IPR031968 | - | |
| Eupl14g01111 | 567 | MobiDBLite | consensus disorder prediction | 138 | 157 | - | - | |
| Eupl14g01111 | 567 | MobiDBLite | consensus disorder prediction | 418 | 433 | - | - | |
| Eupl14g01111 | 567 | PANTHER | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC | 2 | 560 | - | GO:0043069(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01111 | K27900 | vascular associated death 1, chloroplastic |