AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01128 ATGGGAAGTATTCCAGAGGTAGTGCTAAGTTCGGGAGGGAGGATGGCAGTATTGGGGATGGGAACAGCAGCCCATCCTATCCCACCTCCTGACCTCATTCATTCCTCCGTCATTTATGCCATTGAATTGGGCTACAGGCACTTTGACACCGCCAGTGTGTACCAATCTGAGCCACCCATTGGTCAAGCAATTTCACAAGCCATCAAGCGAGGCCTTATTGTGAGTAGAGACCAGCTGTTCATCACCTCCAAGCTCTGGTGCACCGATGCACACCACGACCTTGTCGTTCCAGCTCTCCACAAAACTCTCCAGGCTCTGGGGTTGGAGTACGTGGATTTGTACCTCATTCATTTCCCAGTGAGACTGAAAGGAGAGAATATAAGCTTCTCCATTAACAAGGCAGATCTTCTTCCCTTTGATATTAAGAGCACATGGGAATCCATGGAGGAGTGTCAAAGACTCGGCCTTGCTAAGTCTATTGGAGTTAGCAACTTCTCGTGCAAGAAGCTCTCACAACTTCTAGCCCATGCAACTATCCCTCCGGCCGTGAATCAGGTGGAAATGCACCCTTTTTGGCAACAAAAGGAATTGAGAGATTTCTGTGCAAACAATGGTATACATTTGAGTGCTTACTCTCCTTTGGGAGGAAAGGGTTCTTCTTGGGGCTCCAACCTAGTTCTCGAATCAAACGAAATCAAACAGATTGCTCAGGCTAAAGGAAAGAGCATTGCACAGAATGGGGGTTGCAATGTGCAGGTCTGTTTGAGATGGGCATTTGAGCAAGGGGTGAGCTTTTTACCCAAAAGCTTCAACAAAGAAAGGCTGAAAGAAAATATAGAGATTTTCGATTGGCAACTAAGTGAGGATGAGTTGCAGAAGATTAGTCTCCTTCCACAGCGAAAGGTTTTCCAAGGAAATGAGTTTGTCTCGGCTGAAGGGCAATACAAATCAGTTGTTGATTTCTGGGATTGTGAAGTATGA 981 46.38 MGSIPEVVLSSGGRMAVLGMGTAAHPIPPPDLIHSSVIYAIELGYRHFDTASVYQSEPPIGQAISQAIKRGLIVSRDQLFITSKLWCTDAHHDLVVPALHKTLQALGLEYVDLYLIHFPVRLKGENISFSINKADLLPFDIKSTWESMEECQRLGLAKSIGVSNFSCKKLSQLLAHATIPPAVNQVEMHPFWQQKELRDFCANNGIHLSAYSPLGGKGSSWGSNLVLESNEIKQIAQAKGKSIAQNGGCNVQVCLRWAFEQGVSFLPKSFNKERLKENIEIFDWQLSEDELQKISLLPQRKVFQGNEFVSAEGQYKSVVDFWDCEV 326
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01128 326 Gene3D - 4 326 IPR036812 -
Eupl14g01128 326 FunFam NAD(P)-linked oxidoreductase superfamily protein 5 313 - -
Eupl14g01128 326 PRINTS Aldo-keto reductase signature 40 64 IPR020471 GO:0016491(InterPro)
Eupl14g01128 326 PRINTS Aldo-keto reductase signature 148 165 IPR020471 GO:0016491(InterPro)
Eupl14g01128 326 PRINTS Aldo-keto reductase signature 182 211 IPR020471 GO:0016491(InterPro)
Eupl14g01128 326 PRINTS Aldo-keto reductase signature 101 119 IPR020471 GO:0016491(InterPro)
Eupl14g01128 326 PANTHER ALDO-KETO REDUCTASE 7 301 IPR020471 GO:0004032(PANTHER)|GO:0005829(PANTHER)|GO:0016491(InterPro)
Eupl14g01128 326 ProSitePatterns Aldo-keto reductase family signature 1. 44 61 IPR018170 GO:0016491(InterPro)
Eupl14g01128 326 CDD AKR-AKR4A-4B 11 299 IPR044497 GO:0016616(InterPro)
Eupl14g01128 326 SUPERFAMILY NAD(P)-linked oxidoreductase 7 297 IPR036812 -
Eupl14g01128 326 PIRSF AKR 3 321 IPR020471 GO:0016491(InterPro)
Eupl14g01128 326 ProSitePatterns Aldo-keto reductase family putative active site signature. 266 281 IPR018170 GO:0016491(InterPro)
Eupl14g01128 326 ProSitePatterns Aldo-keto reductase family signature 2. 148 165 IPR018170 GO:0016491(InterPro)
Eupl14g01128 326 Pfam Aldo-keto reductase family 20 294 IPR023210 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01128 K22374 3''-deamino-3''-oxonicotianamine reductase [EC:1.1.1.285]
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:21846525 Eupl4g01931 Eupl-Chr4:44996855 dispersed
Eupl Eupl-Chr14:21846525 Eupl4g00541 Eupl-Chr4:8392830 transposed