Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01130 | ATGGCATCGACCAACCCATTTGACCTTCTGGGGGACGACGATAACGATGACCCGTCGCAATTGATCGCTGCTCAGCAGCAGAAGGTGGTGCCACCGAAGAAAGCCCTAGCTCCGACCACCCAAACCACCACTGCTCCTCCCAAGCAGCAGCAGCCCAAGATGCCCTCCAAGCCTCTCCCTCCAACTCAGGCTGTGAGGGAGTCAAAGAATGAAGGGCGTGGAGGGGGACGCGGTGGTGGACGTGGATTTGGCCGTGGACGTGGTGGCGGTGGATTTAACAGAGACTCGGTCAGTAATGAAAATTCATTCGGCAACAATGCAGTACCTGGGGGGTATGGTGCTGCTGAAGATGGGGATATCGGGAAGCCCTCGGAAAGGCGTGGGGGTTATAGTGGACCTCGTGGTCCTACCCGTGGTGGTCGACGAGGCGGTTTCAGCAACGGTGAAGTAGAGGATGAGGAACGCCCTCGGAGAGTATTTGAGCGTCGAAGTGGGACTGGTCGCGGGAATGAGCTTAAACGTGAAGGGTCTGGTCGTGGGAATTGGGGAACAACCATTGATGAAATCCCTCAGGAGAGTGAGGAACTTGTCATTGCAAGTGAGAAGAGCTTAAGCACAGAAAAGAAGCCTGGAGAGGAAGATGCTGTAGATGCCAACAAGGAGAATCCTGTGAATGAGCTGGAAGAGAAAGAACCTGAAGATAAGGAGATGACTCTGGAAGAGTATCAGAAGGTACTGGAAGAGAAAAGGAAGGCTCTACTAGCACTGAAGGCTGAGGAAAGGAAGGTTGACTTGGACAAAGACTTTGAGACCATGCAAATGCTTTCGAACAAAAAGGCTAATGACGATATCTTCATCAAACTGGGCTCTGAGAAGGATAAGCGAAAAGAGATTGCTGACAAGGAAGAGAGAGCCAAAAAGATGGGAGGGCAAATTTTTGTGTTTCGTAAGTGTGGCATTTTCTTCAAGAATGGATGCCTGTATTTGCCATGCCTTGCTGGTAGATCATTTAAGCGTAGATGGGCGCTTCAAAAGCCTGTGGTAACTGAATCAGCAGCAGCAGCAGATCGACCAGCTGAAAAATTTATTGTATCAGGGAGGATGCTTGATATGCTGTTTTGA | 1122 | 50.45 | MASTNPFDLLGDDDNDDPSQLIAAQQQKVVPPKKALAPTTQTTTAPPKQQQPKMPSKPLPPTQAVRESKNEGRGGGRGGGRGFGRGRGGGGFNRDSVSNENSFGNNAVPGGYGAAEDGDIGKPSERRGGYSGPRGPTRGGRRGGFSNGEVEDEERPRRVFERRSGTGRGNELKREGSGRGNWGTTIDEIPQESEELVIASEKSLSTEKKPGEEDAVDANKENPVNELEEKEPEDKEMTLEEYQKVLEEKRKALLALKAEERKVDLDKDFETMQMLSNKKANDDIFIKLGSEKDKRKEIADKEERAKKMGGQIFVFRKCGIFFKNGCLYLPCLAGRSFKRRWALQKPVVTESAAAADRPAEKFIVSGRMLDMLF | 373 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01130 | 373 | Gene3D | - | 153 | 267 | - | - | |
| Eupl14g01130 | 373 | SMART | HABP4-PAI-RBP1-2 | 156 | 264 | IPR006861 | - | |
| Eupl14g01130 | 373 | MobiDBLite | consensus disorder prediction | 145 | 175 | - | - | |
| Eupl14g01130 | 373 | PANTHER | HYALURONIC ACID-BINDING PROTEIN 4 | 1 | 307 | IPR039764 | GO:0003723(PANTHER)|GO:0003723(InterPro)|GO:0005634(PANTHER)|GO:0005737(PANTHER) | |
| Eupl14g01130 | 373 | MobiDBLite | consensus disorder prediction | 1 | 236 | - | - | |
| Eupl14g01130 | 373 | MobiDBLite | consensus disorder prediction | 201 | 236 | - | - | |
| Eupl14g01130 | 373 | MobiDBLite | consensus disorder prediction | 36 | 50 | - | - | |
| Eupl14g01130 | 373 | Pfam | Stm1 | 1 | 79 | IPR019084 | - | |
| Eupl14g01130 | 373 | Coils | Coil | 239 | 262 | - | - | |
| Eupl14g01130 | 373 | Pfam | Hyaluronan - mRNA binding family | 156 | 263 | IPR006861 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01130 | K13199 | plasminogen activator inhibitor 1 RNA-binding protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:22182205 | Eupl7g00438 | Eupl-Chr7:10647099 | dispersed | |
| Eupl | Eupl-Chr14:22182205 | Eupl8g00840 | Eupl-Chr8:24014277 | wgd |