AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01130 ATGGCATCGACCAACCCATTTGACCTTCTGGGGGACGACGATAACGATGACCCGTCGCAATTGATCGCTGCTCAGCAGCAGAAGGTGGTGCCACCGAAGAAAGCCCTAGCTCCGACCACCCAAACCACCACTGCTCCTCCCAAGCAGCAGCAGCCCAAGATGCCCTCCAAGCCTCTCCCTCCAACTCAGGCTGTGAGGGAGTCAAAGAATGAAGGGCGTGGAGGGGGACGCGGTGGTGGACGTGGATTTGGCCGTGGACGTGGTGGCGGTGGATTTAACAGAGACTCGGTCAGTAATGAAAATTCATTCGGCAACAATGCAGTACCTGGGGGGTATGGTGCTGCTGAAGATGGGGATATCGGGAAGCCCTCGGAAAGGCGTGGGGGTTATAGTGGACCTCGTGGTCCTACCCGTGGTGGTCGACGAGGCGGTTTCAGCAACGGTGAAGTAGAGGATGAGGAACGCCCTCGGAGAGTATTTGAGCGTCGAAGTGGGACTGGTCGCGGGAATGAGCTTAAACGTGAAGGGTCTGGTCGTGGGAATTGGGGAACAACCATTGATGAAATCCCTCAGGAGAGTGAGGAACTTGTCATTGCAAGTGAGAAGAGCTTAAGCACAGAAAAGAAGCCTGGAGAGGAAGATGCTGTAGATGCCAACAAGGAGAATCCTGTGAATGAGCTGGAAGAGAAAGAACCTGAAGATAAGGAGATGACTCTGGAAGAGTATCAGAAGGTACTGGAAGAGAAAAGGAAGGCTCTACTAGCACTGAAGGCTGAGGAAAGGAAGGTTGACTTGGACAAAGACTTTGAGACCATGCAAATGCTTTCGAACAAAAAGGCTAATGACGATATCTTCATCAAACTGGGCTCTGAGAAGGATAAGCGAAAAGAGATTGCTGACAAGGAAGAGAGAGCCAAAAAGATGGGAGGGCAAATTTTTGTGTTTCGTAAGTGTGGCATTTTCTTCAAGAATGGATGCCTGTATTTGCCATGCCTTGCTGGTAGATCATTTAAGCGTAGATGGGCGCTTCAAAAGCCTGTGGTAACTGAATCAGCAGCAGCAGCAGATCGACCAGCTGAAAAATTTATTGTATCAGGGAGGATGCTTGATATGCTGTTTTGA 1122 50.45 MASTNPFDLLGDDDNDDPSQLIAAQQQKVVPPKKALAPTTQTTTAPPKQQQPKMPSKPLPPTQAVRESKNEGRGGGRGGGRGFGRGRGGGGFNRDSVSNENSFGNNAVPGGYGAAEDGDIGKPSERRGGYSGPRGPTRGGRRGGFSNGEVEDEERPRRVFERRSGTGRGNELKREGSGRGNWGTTIDEIPQESEELVIASEKSLSTEKKPGEEDAVDANKENPVNELEEKEPEDKEMTLEEYQKVLEEKRKALLALKAEERKVDLDKDFETMQMLSNKKANDDIFIKLGSEKDKRKEIADKEERAKKMGGQIFVFRKCGIFFKNGCLYLPCLAGRSFKRRWALQKPVVTESAAAADRPAEKFIVSGRMLDMLF 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01130 373 Gene3D - 153 267 - -
Eupl14g01130 373 SMART HABP4-PAI-RBP1-2 156 264 IPR006861 -
Eupl14g01130 373 MobiDBLite consensus disorder prediction 145 175 - -
Eupl14g01130 373 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 307 IPR039764 GO:0003723(PANTHER)|GO:0003723(InterPro)|GO:0005634(PANTHER)|GO:0005737(PANTHER)
Eupl14g01130 373 MobiDBLite consensus disorder prediction 1 236 - -
Eupl14g01130 373 MobiDBLite consensus disorder prediction 201 236 - -
Eupl14g01130 373 MobiDBLite consensus disorder prediction 36 50 - -
Eupl14g01130 373 Pfam Stm1 1 79 IPR019084 -
Eupl14g01130 373 Coils Coil 239 262 - -
Eupl14g01130 373 Pfam Hyaluronan - mRNA binding family 156 263 IPR006861 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01130 K13199 plasminogen activator inhibitor 1 RNA-binding protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:22182205 Eupl7g00438 Eupl-Chr7:10647099 dispersed
Eupl Eupl-Chr14:22182205 Eupl8g00840 Eupl-Chr8:24014277 wgd