Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01132 | ATGCCCCCTAAATCCAGCAAAGAAGCTATGGCAGCCTCCCAGTGGCGTAATCTTCCTTCCACCCACCTCGACTTCTCTCAACGCCTCTCGAAACAATTGGATTTTGCCATCGCTCGGGAGGAATCTATCTGGAGAGAAAAATCTCGGGAGTTGTGGCTTAAAGAAGGAGATTGGAATACCAAGTTTTTCCATCTCTCAACACTTATTCGTCGACGTAATAATAAAATCGAGAGTATCAAGGACGACACTAGCCAATGGCAAAGTACCCGTGGTGGAGTGGGTAAAGCCTTTGGTCAGTTTTTACTCCCAATTGTTCACTTCCACTCAACCCAGGAATCTGGATCTTATTCAAGGTGTTATTTCCATAAGTGTGTCTGGCCCCCCCTCCCCCCATCTCTTAAGGAAATTAAAGTGGCTACTTTCAGCATAGGTGCTCACAAAGCTCCTAGCCCTGACGGGTTTACCGGGTTTTTCTTCCAGACCTTCTGGGAAGAGACAAAAGACGACATCCATGCTTTGGTACAGGCCTTCTTTCTTCATGACTGTGAGCTTCAACGCATCAACCATACCCACATTGCTTTTATTCCCAAATCCAATGGTCCCGTGTCCCTTACACAATTTAGACCAATCAGCCTGTGCAATGTGATCTATAAGATTATCTCAAAAATTCTGACTTGTCAACTGCGTCAAATCATTGGTAAGCTTATTTCTCCGAATCAAGCTGCCTTTATTTCGGGTCGTCTTACTTCGGACAATACCATCCTCACACAGGAACTCATGCACCATATTCATAAAAAGAAAGGCAAAGGAGGTCTTATGGCAATCAAGTTGGATATGGTGAAAGCCTATGACCGGATTGAATGGTCTTTTCTGAGCAACATTAATCTAGCCGTGGGCTTCGAGGAGAAGCTTCACCACCTTCACGGCATCCGCATCACCAAAAATTGCCCACCCATATCTCATCTCTTTTTTGCAGATGATTGTTTTGTTTTCTGTAAGGCAAACCTGGTAGAAGCCCAAGCTCTCCAAGATATTCTTCATGCCTTCTGCGAAGGATCTGGCCAGCAAATCAACTATGAAAAATCCGGTATTATGTTTAGTTCCAATCTTCACAGACGGCAGAAGAAAGCAATGCCCTTCATTCTCAGCATTAAGAATCTCTTCCTCTCTGAGAAGTATTTGGGTACACCCATGTTCATAGGCCGATCCAAGACTAAAGCCTTTCACAGTACACGTGAGCATATCGAACAAATCATCCCAGGTTGGTGTGCCCGCACACTCTCCCAAGCAGGTAGATCTACCCTTCTCAAGAGCGTGGTATCTGCCTTACCGATGTATAGCATGTCATCATTCATGTTCCCTCTCACCTTGTGTAATAAATTGGACTCCATGGCAAATCACTTTTGGTGGCAAGGTGGACTCCTCAAAAAATCTCTTCACATTTTGAGTTGGGCTTCCATATGTACTCCCAAAGCCTTGGGCGGTTTGGATTTTCGCAAATTCCATGATGTCAACTTGGCCTTGCTAGTCAAAAATGTGTGGAAATTTTTAACTGAACCTGATTCTCTACTATCTTGCACTCTTAAAGGAAAATATTTCCCCAAGTCATCGCTTTTGGAGACTTCCCCCAAGCAGAGTGACCCGTGGGTTTGGAAGAGCATTCTTCAAGCTAAAGCTCTCTTTAAACATAACTTCATCAAATTGATTGGCTCTGGTCTTCTTACGCATATTTGGACTGACCCTTGGATATTTGATGGGCATCATCTTTTTCATCCCACCCGCCCACCTGATTGCTCCCTTACTATAGTTGCGGAATTAATCACAGACAATCGCACGTGGAACGTCTCCTTGATTCATTCCCTTTTCAATCCTGAGAATCTAATACTATTCTCTCCATTGAACTTAGCCAACATTCCTTTGATGACCGGTGGCTTTGGTCGCTAG | 1944 | 44.24 | MPPKSSKEAMAASQWRNLPSTHLDFSQRLSKQLDFAIAREESIWREKSRELWLKEGDWNTKFFHLSTLIRRRNNKIESIKDDTSQWQSTRGGVGKAFGQFLLPIVHFHSTQESGSYSRCYFHKCVWPPLPPSLKEIKVATFSIGAHKAPSPDGFTGFFFQTFWEETKDDIHALVQAFFLHDCELQRINHTHIAFIPKSNGPVSLTQFRPISLCNVIYKIISKILTCQLRQIIGKLISPNQAAFISGRLTSDNTILTQELMHHIHKKKGKGGLMAIKLDMVKAYDRIEWSFLSNINLAVGFEEKLHHLHGIRITKNCPPISHLFFADDCFVFCKANLVEAQALQDILHAFCEGSGQQINYEKSGIMFSSNLHRRQKKAMPFILSIKNLFLSEKYLGTPMFIGRSKTKAFHSTREHIEQIIPGWCARTLSQAGRSTLLKSVVSALPMYSMSSFMFPLTLCNKLDSMANHFWWQGGLLKKSLHILSWASICTPKALGGLDFRKFHDVNLALLVKNVWKFLTEPDSLLSCTLKGKYFPKSSLLETSPKQSDPWVWKSILQAKALFKHNFIKLIGSGLLTHIWTDPWIFDGHHLFHPTRPPDCSLTIVAELITDNRTWNVSLIHSLFNPENLILFSPLNLANIPLMTGGFGR | 647 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01132 | 647 | CDD | RT-nLTR-like | 189 | 398 | - | - | |
| Eupl14g01132 | 647 | SUPERFAMILY | DNA-RNA polymerases | 143 | 366 | IPR043502 | - | |
| Eupl14g01132 | 647 | PANTHER | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED | 10 | 480 | IPR052343 | - | |
| Eupl14g01132 | 647 | Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) | 195 | 305 | IPR000477 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01132 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:22439030 | Eupl1g00413 | Eupl-Chr1:17205213 | dispersed | |
| Eupl | Eupl-Chr1:4486210 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr1:8958050 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr3:5130697 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr11:22798512 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr13:28448660 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr13:29367797 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr1:4485688 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr9:8559068 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed | |
| Eupl | Eupl-Chr14:19971754 | Eupl14g01132 | Eupl-Chr14:22439030 | wgd | |
| Eupl | Eupl-Chr14:22439030 | Eupl4g01832 | Eupl-Chr4:40320694 | wgd |