AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01155 ATGGAAGCCCTGAGAGCCTCTTACGGTGACTCATCCTCCGACTCGGACGCCGCCTCGTCTCCAAGAAGCGCCAATTCCTACCACAACTCAAATTTCAAAGAATCAGACCGTTTGCCGCCCCCACCTCTCTGCCTTCTCGACCCGCCTAACGCCATAGATTACGTACAAATGGCTCAGGGAAGTCGAGTTAGGAACTTTCCGCATGTTGAAGGAAACTATGCTCTACATGTCTACATCCCAGTTCATATACCAACTACAAGGAGGAAAGAGCCAACCCAATTTTTGAAAAAAGTTGCATCTCTCGTGCCTGGCCTTCATGCTGTTGATGTTGACATCCCGCTTACAATTCTCTGCAAAGATGATCAAAAGCTCGAGCAAGTTGTGCTAGGAAAGGAATTCCACATAAGTTTGGGAAGAACTGTTCCGATCCGAGTTCATCAAATTGACTCAGTTGTGGCAATGCTTCGCCAAAAGCTTCAGTCTCAGAGGCGATATTGGATAGATTTTAGTAAGTGGGCAGTTTTCAACAATGATGAACGCACACGATCCTTTCTTTCAATGGAAGTTGTTGCAGGAGGCTTAGCTGAGATAACAAGGCAGATTCATGTTGTCAATGAGATTTATAGGCTACACAATCTCCCGGAATTTTATAAGGATCCACGCCCTCATATATCCTTAGCATGGGCATCAGGTGACATCAGCCATTCCCTCAAGCAGGTGGTTGAAGAAGAACTGAACAGATACAATACCAATGGGAGTTCCTCAGAGAAACGTATTTTTACATGCAAATTCAGCGGCATCGAGTGTAAGATAGGTAATAAGGTCTATAAAATATGTAGATTCCCAGATGAGTAA 855 44.68 MEALRASYGDSSSDSDAASSPRSANSYHNSNFKESDRLPPPPLCLLDPPNAIDYVQMAQGSRVRNFPHVEGNYALHVYIPVHIPTTRRKEPTQFLKKVASLVPGLHAVDVDIPLTILCKDDQKLEQVVLGKEFHISLGRTVPIRVHQIDSVVAMLRQKLQSQRRYWIDFSKWAVFNNDERTRSFLSMEVVAGGLAEITRQIHVVNEIYRLHNLPEFYKDPRPHISLAWASGDISHSLKQVVEEELNRYNTNGSSSEKRIFTCKFSGIECKIGNKVYKICRFPDE 284
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01155 284 MobiDBLite consensus disorder prediction 1 40 - -
Eupl14g01155 284 FunFam U6 snRNA phosphodiesterase 65 280 - -
Eupl14g01155 284 Pfam Uncharacterised conserved protein 56 279 IPR027521 GO:0004518(InterPro)|GO:0034477(InterPro)
Eupl14g01155 284 MobiDBLite consensus disorder prediction 8 33 - -
Eupl14g01155 284 Hamap U6 snRNA phosphodiesterase [USB1]. 3 281 IPR027521 GO:0004518(InterPro)|GO:0034477(InterPro)
Eupl14g01155 284 Gene3D Cyclic phosphodiesterase 65 279 - -
Eupl14g01155 284 PANTHER UNCHARACTERIZED 1 277 IPR027521 GO:0000175(PANTHER)|GO:0004518(InterPro)|GO:0005634(PANTHER)|GO:0034477(PANTHER)|GO:0034477(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01155 K23093 U6 snRNA phosphodiesterase [EC:3.1.4.-]