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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01156 ATGTCAGGCATGGAAGATAGCAAAGAGCATGAGCAGGTTGATGGAGAGTTCCCTCAGGACCCAGAACCATCAATGCCATCACCCCAAGAGCAGGAGGAAGTAGTCAAGAAAAAATATGGAGGACTTTTGCCTAAAAAGCCACCACTCATATCCAAGGACCATGAGCGTGCTTACTTTGATTCCGCGGATTGGGCACTCGGAAAGCAAGGAGCACCTGTAGAGAAGCCCAAAGGACCACTTGAGGCACTTCGTCCTAAATTGCAGCGAACGCAACAACAAGCGCGCTCCCGAAAATCGCCTTATGCTCCTGCAGATGGTGAAGATGGAGGGAACGCTTCCTCTGAGGACGTGACTGCAAATGAATGA 366 50.27 MSGMEDSKEHEQVDGEFPQDPEPSMPSPQEQEEVVKKKYGGLLPKKPPLISKDHERAYFDSADWALGKQGAPVEKPKGPLEALRPKLQRTQQQARSRKSPYAPADGEDGGNASSEDVTANE 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01156 121 MobiDBLite consensus disorder prediction 1 54 - -
Eupl14g01156 121 PANTHER ENDOSULFINE 9 107 IPR006760 GO:0004864(PANTHER)|GO:0005737(PANTHER)|GO:0035308(PANTHER)
Eupl14g01156 121 MobiDBLite consensus disorder prediction 1 17 - -
Eupl14g01156 121 Pfam cAMP-regulated phosphoprotein-endosulfine conserved region 26 99 IPR006760 -
Eupl14g01156 121 MobiDBLite consensus disorder prediction 68 121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01156 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr11:10137956 Eupl14g01156 Eupl-Chr14:24420178 dispersed
Eupl Eupl-Chr14:24420178 Eupl7g01514 Eupl-Chr7:36670395 dispersed
Eupl Eupl-Chr14:24420178 Eupl4g01110 Eupl-Chr4:16959125 transposed