AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01163 ATGTCTGGACCAGAAACAGATTCCACCGCCACCCATGTCGCTTCACTTATTAAGAGCTTTCGCCTAGTTCCACCTGCAGCTGTTCCGGCAATCGTCGACTGCATTTTAACTTCTACTGGCCTCACTCCTTCTTCGCTCTTCGATTCGATTCTCGACGCTTTCTCCAATCTCACAAAGGATATTCTCAAGGAGGAGCATAAAGAACTAGATTCTGTTCAGTCTAGCTATATCGTATGCTTCACCACTGCACTCTGTTACCTTGTAAAGAAGTCTGGAACCAATCCTGATGCCTTGCAATCATTTATTTGGAGAGGTTTTCTTCCGCCAATGAAGATTATACATGTAAATGACCACGAATTACTTAACCAGATTGCAGAATTACTCTGTGATGTTGTGATGGAAACTAACACCTGGGGAGTCATAGAAGTGACTTTGGTGCCTTTTTCTCTAAGGTCGGTTGGTCTTTCTATAGGCATGCTTCAAAATGAAGAATCAGCCATTTACCAATGGAGTAGACCCTTAGTCATTCAAGGGGCAAATGGCAATCTTAGTGAGTGGGATGTAGATCAAGAGTTCATGCTGTCTTTATCTGAATCTTTGCCATTGCCTATCTCATGCCATATTTTAACTTCACTACTTTCCGCTTCTCTAAGAAGTCATCAAGCAGTGCAGAGCCCATTACAACCAATGGTGGTATATGGGTGTTGTGCAGAATATTTTGCTAGAAATTTGCTCTGGGATCTCTGTGATATGGCAGTACGAATGCTTTTACAATGTCCGGAACACCGTTCCTGTACAATTCGACTTCTCCTTCCATTCATTTTCAGGGCATTTGTTTCTCATCGTTCTTTTGAAATATCAATACATGGGCAGACACATGTGCTTTCCAGGGAGTATTTATTTGGGAAAATTTGGAAGTGCTGCAGAACACTGTTTTTTCTTGGACCTCTAGAGAAAAAAGATGCATATAATGTACTCTCTTTGTACTTGTCTATTTTCTTTAACATAGAAGGATGTGAAGATGTTGCTGAAAGTCATGGGGTAGAAGCATTCGATATAAGAGATGAAAAAGAATTTTGGGCCGAAATAAAAAGAGGCTTGGTTGATAAGGAGGGCTTGGTGAGGAAGCAGTCATTACATATATTGAAAATTTTACTGCGAAGACGTGATGGAACGCGATTCCTTAATGGTGCTTCAGAGTCGATTTTGCATGAAAAATGTTCAAAACCTCATGGCATGACAAAGAGGGGTCAATGGGCTGAAAAGGAAGCCAAGTCATTGGGTGTGGGGCAAATATGCAATTCGGCTGATCCCTGTTTGAATGGCCAACTGAGATGGGAGGCATTCCTACTTCTATATGAGATGCTTGAAGAGTATGGTACACACTTAGTTGAAGCAGCTTGGAATCACCAGATATCATTGTTGCTTCATTTTTCTTGCCCACAATATTCTTCTACGAATCCTATTAGTGGTGGAGTTTATCAAATCCAAATGGAAACTTTAGAGGGAATCTTTAGCTGGCTAGCGATTTTATGGGAACGAGGTTTTTGTCATGAAAATCCTCAAGTTAGGTGCTTGATCATGCAGTCGTTTTTGGGCATTGACTGGAAGAATCAGGGGAACTGTGCAAAACTAGTGCCTGCAAGTTTTGTATTTGGTCCACTCATACAAGGGTTGAATGACACTGTGCACCACAGAGATTTTGGTGTAAAAGGAGTTTACTCTTCGAAAACGATTGAGGGTGCAACCAATTTTTTATACCACTTCTCTAGTTACTTCTGTTGGAGGGAACGGGTAGCATTTCTGTGCAGTTTGGCATCTGTTGCTAAACAGGAGTCCTTGGGACGGGCTGGATTGATGGCTCTTTCTGATTGCATTGCTGCAGCTGCTCGTGCAGTTGAAACACATTGTGAAGGTGAAGCGCAATGGTGTGAAGTTGATTCGTGTGACATGATTCAAGTGGAATCTGCTGAAGAATGTTCTTTCCACAATAATAAGGCAGATTTATTGGATATCCTGAGACATGTTATGGAAAGCAGCAAACAACACTTTAATCCTAATTACCGTCTTCGAGTTTGTGAGAAAGTTCTGGAGGCTGCTTCTTCTGTGATGTGTACATCTGATGTGCCTCTTGAGACGCTTATGCACTTCTTTTCAGCTATGCCACGGGAATTTACTGATTGTGGTGGTTCTTTGAGGGTGAAAGCACAAGAATGGTTTTCTGGGTCCAATAAAAAGCATTGGAGTTTCAATTCCTTTAGTACTAGAATGCAGGTTCTGAAGAGTCTCTGTGATTTCCCCAAAGCATTCATAAATCATCATCATTCGTCTGATGCTTTTGTTACTTGTGACGATGAAGACTTGGATGCATGGGGATTTGCGGCACAAAGATGGGCAAGAGTGCTTTTCCTTGTAATGACAGAGGAAGACCAATTGGAGCCTGTATTCAAGTTTCTCCAGAATTATGGCATTAATATCTGCAGAAAAAACAAACCTTTGGGATGGATTCCTCCTAAGTTTCTCATCCTTGCGTTAAGCTTGGTCCAAGAGCTTCGGATCAGACAAAAGAAATCGACTGAATGTGCTACGAATGTAAGAAGCGGGATGGAAGTTGGCATGCGTGACACATCAGATCAATTGAATTCAACAGAAGCTTCCATTGTTTTTGTGAAATTTGCCAATTCTTTTCTTTTTATATTGGAGGAGTTTGTCTCATTTGCCAAATCAGCTTGTTCCATATTCTGGTCCAGCCCTGTGATTGAGGACACACTTTTACCTTGTTCTGTTAGAGGAAGGCTTGGAGGCCCAAGCCAAAGACGGTTGGCTTCTTCTACCACTACTGCCGTGTTGCAAGCTATTTTATCCATGAAGACTGTTGCATCTATTTCATCATGGTGTGCACAGTTTAAAAATGATGCTTTGCTTGATTCCACCTTTACTTTCTTATGGAGTTTTATTTGGAAGGTTATCTTGTCTCCAACATATGACTCGGAGACTGGAGCGGAAATTCGTCTAGCAGCATATGAGGCATTAGTTCCTGTTTTAAAGGCACTGGATTCTACCATCTCTCCATTTGTTTTTGATTTGATATTGGCCAACGACCAATCAGTGCTACCAAAAGTAGAAGACAAACCTTTGCTAGATCCTTTGGTTCTCTGTTTTCTTCAGAATGTCAATGATCTCCTTGCAGTTGGAGTTTTAGCACGAAGTAGACAGGCCGTTTTGATGAATTGGAAGTGGCTCTGTCTAGATTCTCTGTTGTCAATTCCTTACTGTGCCATTGAAAATGGAGTTCAGCTACGTGGCACTCCTGCCTTCTTTTCTGGTGCATCTATCAGATGTATTTTTGCTGATCTTGTCGACAGCCTTGAGAATGCCAGTGAAAGTTCTGTTTTGCCAATATTGAGATCTGTCAGATTGGTTTTGGGGATGTTTGCTTCAGGAAGGATGGGTTCAGTAGTTTCTTTATGTAATGGCGTGGATACTCAGATGATGTTGCAGTTGGTACGTTCTTCTTGGATATTACATGTCAGCTGCAACAAGCGTAGAGTTGCACCTCTTGCTGCACTTCTATCATCTGTGTTGCATTCTTCTGTGTTCATTGATGAGAGCATGCATGAAACTACTGACAGTGCTCAAGGTCCTTTGAAGTGGTTTGTTGAAAATATTCTTGATGAAGGCACAAAAAGTCCTCGTACGATTCGTCTTGCAGCTTTGCACTTAACAGGGTTATGGCTCTTAAATCCAAGAACAATAAAGTATTACATGAAAGAGCTGAAGCTGCTGTCATTACATGGTTCTGTGGCTTTTGATGAGGATTTTGAAGCTGAATTAGCTGAAAATCATGATGCAAGGATAGAAGTTTCATTGCTGGCTAAAAGCCCAGACCCTGAACTAACTGAAGTATTTATCAACACAGAGTTGTATGCACGTGTATCTGTTGCTGTTCTCTTTTACAAGCTAGCAGACCTGGCTGATATGGTGGGATCCTTAAAGGAAAACGAAGATTGCCATGTCGCGCTTCATTCTGGCAAATTGTTTCTGTTAGAGCTTCTTGACTCTGTGGTAAATGACATGGATCTTGCAAAGGAGTTGTATAAAAAATATAGCGGGATCCATAGGCGAAAAGTCCGTGCTTGGCAAATGATATGTATATTGTCACGATTCGTTGACGAAGATATAGTTCAACAAGTCACATCTAGCTTGCACATATGCCTATATAGAAACAACTTGCCAGCTGTTCGACAATACTTGGAAACATTCGCAATCCAAATTTACCTAAGATTTCCATCATTGGTTAAGGAGCAATTGACTCCAATCTTTCGGGACTATGATATGAGACCTCAGGCACTTTCTTCATATGTTTTCATAGCAGCCAATGTTATCCTCCACGCAACTGAGGAGCATATTCGGTTAAGACATTTGGACGAGTTACTCCCACCTATAATTCCGTTTTTAACCTCTCATCATCACAGCTTACGTGGTTTTACTCAGTTGCTAGTGTACCAAGTTCTTTGCAAGCTGGTGCCTGCCTTGGATTCTAATGGTTCTGAACTTGTTCCTTTAGAAAAAAGGTGCTTCGAGGATTTGAAATCGTATTTGGAGAAAAACTCCGACTGTGTGAGGTTAAGGGCATCAATGGGAGGATTTCTGGATGCATTTAATCCCAAGACATCTGCTACTCCTGCTGGAATTTTTACTGCCCGGGATGAGGGATCTGAGTTTGAATGTGTTCCAACATCCCTCATGGAGCAAGTCATCACTTTTTTGAATGATGTTAGGGAAGATCTTAGATGTTCTATGGCTAAGGATATTGTTACTATCAAGAATGAGAGCTTAACAACTGAAGAAAATTGTAATGGCATGGATGTTTTACTAAAGGACGATCAAGAAAGATTGCCTTCCCAGGTTCCTAGAGATTTATCTTTGGATTTCCAAAAGAAAGTTACTTTCTCTAAACATGAGAGGGGGGACCATTGTGCTACTTCATTTTTGGGCAACACCGAACTTTACAAATCACTTATAGAAATGGAGAAAGAAGATCAGCTTCTTAATGAAGTGTTGCAGTCAAGAAGTAGAGCTATGGAAGAGATAAGAGCAAGTCGACAACATTTTATCCTTGTTGCATCATTACTTGATCGCATACCTAACCTTGCTGGATTAGCACGGACATGTGAGGTATTTAAAGCAGCAGGTTTAGCCATTGCTGATGCAAGTATTGTACATGATAAACAGTTCCAGCTCATCAGTGTGACAGCTGAGAAGTGGGTCCCTATCATAGAGGTCCCAGTTAGCAGTGTGAAAGTTTTCTTAGAGAAAAAGAAGCGAGAGGGTTTCTCTATCTTGGGTTTAGAGCAGACTGCGAACAGTATACCTCTCGACCAGTATACCTTCCCAAAAAAGACGGTTCTGGTTCTTGGGCGTGAAAAGGAGGGCATACCCGTGGATATAATCCATGTTCTGGATGCTTGTGTTGAGATTCCTCAGTTGGGAGTCGTTAGGTCACTCAACGTTCATGTCAGTGGTGCTATTGCTCTATGGGAATATACTCGACAGCAAAGATCTCAACATTCCTCATCTTTCTGA 5586 41.39 MSGPETDSTATHVASLIKSFRLVPPAAVPAIVDCILTSTGLTPSSLFDSILDAFSNLTKDILKEEHKELDSVQSSYIVCFTTALCYLVKKSGTNPDALQSFIWRGFLPPMKIIHVNDHELLNQIAELLCDVVMETNTWGVIEVTLVPFSLRSVGLSIGMLQNEESAIYQWSRPLVIQGANGNLSEWDVDQEFMLSLSESLPLPISCHILTSLLSASLRSHQAVQSPLQPMVVYGCCAEYFARNLLWDLCDMAVRMLLQCPEHRSCTIRLLLPFIFRAFVSHRSFEISIHGQTHVLSREYLFGKIWKCCRTLFFLGPLEKKDAYNVLSLYLSIFFNIEGCEDVAESHGVEAFDIRDEKEFWAEIKRGLVDKEGLVRKQSLHILKILLRRRDGTRFLNGASESILHEKCSKPHGMTKRGQWAEKEAKSLGVGQICNSADPCLNGQLRWEAFLLLYEMLEEYGTHLVEAAWNHQISLLLHFSCPQYSSTNPISGGVYQIQMETLEGIFSWLAILWERGFCHENPQVRCLIMQSFLGIDWKNQGNCAKLVPASFVFGPLIQGLNDTVHHRDFGVKGVYSSKTIEGATNFLYHFSSYFCWRERVAFLCSLASVAKQESLGRAGLMALSDCIAAAARAVETHCEGEAQWCEVDSCDMIQVESAEECSFHNNKADLLDILRHVMESSKQHFNPNYRLRVCEKVLEAASSVMCTSDVPLETLMHFFSAMPREFTDCGGSLRVKAQEWFSGSNKKHWSFNSFSTRMQVLKSLCDFPKAFINHHHSSDAFVTCDDEDLDAWGFAAQRWARVLFLVMTEEDQLEPVFKFLQNYGINICRKNKPLGWIPPKFLILALSLVQELRIRQKKSTECATNVRSGMEVGMRDTSDQLNSTEASIVFVKFANSFLFILEEFVSFAKSACSIFWSSPVIEDTLLPCSVRGRLGGPSQRRLASSTTTAVLQAILSMKTVASISSWCAQFKNDALLDSTFTFLWSFIWKVILSPTYDSETGAEIRLAAYEALVPVLKALDSTISPFVFDLILANDQSVLPKVEDKPLLDPLVLCFLQNVNDLLAVGVLARSRQAVLMNWKWLCLDSLLSIPYCAIENGVQLRGTPAFFSGASIRCIFADLVDSLENASESSVLPILRSVRLVLGMFASGRMGSVVSLCNGVDTQMMLQLVRSSWILHVSCNKRRVAPLAALLSSVLHSSVFIDESMHETTDSAQGPLKWFVENILDEGTKSPRTIRLAALHLTGLWLLNPRTIKYYMKELKLLSLHGSVAFDEDFEAELAENHDARIEVSLLAKSPDPELTEVFINTELYARVSVAVLFYKLADLADMVGSLKENEDCHVALHSGKLFLLELLDSVVNDMDLAKELYKKYSGIHRRKVRAWQMICILSRFVDEDIVQQVTSSLHICLYRNNLPAVRQYLETFAIQIYLRFPSLVKEQLTPIFRDYDMRPQALSSYVFIAANVILHATEEHIRLRHLDELLPPIIPFLTSHHHSLRGFTQLLVYQVLCKLVPALDSNGSELVPLEKRCFEDLKSYLEKNSDCVRLRASMGGFLDAFNPKTSATPAGIFTARDEGSEFECVPTSLMEQVITFLNDVREDLRCSMAKDIVTIKNESLTTEENCNGMDVLLKDDQERLPSQVPRDLSLDFQKKVTFSKHERGDHCATSFLGNTELYKSLIEMEKEDQLLNEVLQSRSRAMEEIRASRQHFILVASLLDRIPNLAGLARTCEVFKAAGLAIADASIVHDKQFQLISVTAEKWVPIIEVPVSSVKVFLEKKKREGFSILGLEQTANSIPLDQYTFPKKTVLVLGREKEGIPVDIIHVLDACVEIPQLGVVRSLNVHVSGAIALWEYTRQQRSQHSSSF 1861
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01163 1861 PANTHER RNA METHYLTRANSFERASE 12 1855 IPR045330 GO:0016423(PANTHER)|GO:0030488(PANTHER)
Eupl14g01163 1861 Gene3D - 1684 1860 IPR029026 -
Eupl14g01163 1861 SUPERFAMILY alpha-beta knot 1693 1855 IPR029028 -
Eupl14g01163 1861 Pfam SpoU rRNA Methylase family 1705 1847 IPR001537 GO:0003723(InterPro)|GO:0006396(InterPro)|GO:0008173(InterPro)
Eupl14g01163 1861 CDD SpoU-like-TRM3-like 1705 1849 IPR044748 GO:0016423(InterPro)|GO:0030488(InterPro)
Eupl14g01163 1861 SUPERFAMILY ARM repeat 362 1544 IPR016024 -
Eupl14g01163 1861 FunFam probable methyltransferase TARBP1 1700 1859 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01163 K15333 tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]