AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01178 ATGGCCACCACCCTTTTCTGCTTCTCTTCTTCTCTTCTTGTTCCCTTATCTAATCCTTCCACTCCAAAGCCTAAACACCGGACGACTCTACTCTGCGCCGGCTTATCCTTCACCCGTACCCTTTCAGTCTATTCGAACTCCACTGGGAGGCTAAAGGGACAGCAATCTTTCGCTCTTGGAAGCGACTTTTTGGGAGATTTTGGTGCCAGAGACCCGTTCCCGGCAGAAATCGAGAGTGGTTTTGCAGAGAAGGTGTTGGGCAATGTCAACACCGAGCATCGAATCCTCATTCCTAATTTATCTGCTCTCTCTCTGGCCCAACAAGAATGCAGTCCAGTTTCTATTTCGCAGCCTCCCATGTTGGAAGATGACGCTCAGAAGCTATTAAAAAAGGTTGTTGGTTGGAGACTCGTGGATAATGAAGGGGGCCTTAAACTTCAGTGCCTATGGAAGTTGAGAGATTTCAAATGTGGGGTTGAACTCATCAATAGAATTTCTACAATTGCTGAGGCTGCTGGGCATTACCCAAATCTTCATTTGGAACATCCCAATCAAGTTAGGGCTGAACTATGGACCAGTTCCATTGGTGGACTGACTATGAATGACTTTATCGTGGCTGCTAAAATAGATGAGATCAAAACATCGGATCTTGCCCCTAAGAAACGCATTTGGGCGTAG 678 46.46 MATTLFCFSSSLLVPLSNPSTPKPKHRTTLLCAGLSFTRTLSVYSNSTGRLKGQQSFALGSDFLGDFGARDPFPAEIESGFAEKVLGNVNTEHRILIPNLSALSLAQQECSPVSISQPPMLEDDAQKLLKKVVGWRLVDNEGGLKLQCLWKLRDFKCGVELINRISTIAEAAGHYPNLHLEHPNQVRAELWTSSIGGLTMNDFIVAAKIDEIKTSDLAPKKRIWA 225
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01178 225 CDD PCD-DCoH-subfamily-a 134 212 - -
Eupl14g01178 225 SUPERFAMILY PCD-like 118 212 IPR036428 GO:0006729(InterPro)|GO:0008124(InterPro)
Eupl14g01178 225 Gene3D Transcriptional coactivator-pterin dehydratase 120 217 IPR036428 GO:0006729(InterPro)|GO:0008124(InterPro)
Eupl14g01178 225 PANTHER PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE 71 215 IPR001533 GO:0006729(InterPro)|GO:0008124(PANTHER)|GO:0008124(InterPro)|GO:0009536(PANTHER)
Eupl14g01178 225 Pfam Pterin 4 alpha carbinolamine dehydratase 119 212 IPR001533 GO:0006729(InterPro)|GO:0008124(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01178 K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]