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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01179 ATGGAATCGTCCACCTACTTGGGCAGCTTGACGAGGCCTTGGTTTGTTGGAGACGACGATTGTCTCGTGGACATGGAAGCTGGGTTTTCTGGGAACCCCCACCCTGTCTTCTCCCAATCTTCCTCATGTAATAATATTCCGACGAAGAGGAGTAGTAGTTACAGAGGTTTCTCTTCTTTTTCTTCTACTTATTCACCGAGGTCGGGAAGGTTTTTTGACGCCAGATCCGAAGAACACCACCACCCTCATTTCCTTCATGCTTGTTTTCTCTGCAAAAACCCTCTCGGAGATAACAGAGACATCTTCATGTACAGGGGAGATACTCCGTTCTGTAGCGAGGAGTGCAGACAAGAGCAGATAGATAGAGACGAGGCGAAAGAGAAGAACGGGAGCCTGTCTTCCTCTTCGAAGGGAATTAGGAAAGATCAACAGAAATCTAGCCCCAACAAAACCCAGAATTACCATGTGAGGACGGGCACCGTTGCAGCTGCTTGA 495 48.28 MESSTYLGSLTRPWFVGDDDCLVDMEAGFSGNPHPVFSQSSSCNNIPTKRSSSYRGFSSFSSTYSPRSGRFFDARSEEHHHPHFLHACFLCKNPLGDNRDIFMYRGDTPFCSEECRQEQIDRDEAKEKNGSLSSSSKGIRKDQQKSSPNKTQNYHVRTGTVAAA 164
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01179 164 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 50 163 IPR044533 -
Eupl14g01179 164 ProSiteProfiles Zinc finger FLZ-type profile. 83 127 IPR007650 -
Eupl14g01179 164 MobiDBLite consensus disorder prediction 131 158 - -
Eupl14g01179 164 MobiDBLite consensus disorder prediction 121 164 - -
Eupl14g01179 164 Pfam zinc-finger of the FCS-type, C2-C2 75 126 IPR007650 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01179 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:25653810 Eupl3g01450 Eupl-Chr3:40695625 dispersed
Eupl Eupl-Chr14:25653810 Eupl8g00953 Eupl-Chr8:27005767 wgd