Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01216 | ATGGCAAGAAAGATCTTCATCTCAAGAACAGCTGCTAAAACCCTAAATCAAATCCTCCGACGACCTCCATCCCCTTCGATCAACTCTCCTTGGGTTTCACCTTCTGCGGTTTCTCAATGCCTCAGACCGCTACACTCATTCGTTTCACACCTATTCCATTTTCGCAATATGGAGATAATCCAACCCTGCAATTCCAGATGCATGGTCACTTGCTCGATACCCCATTATGATATTGTGGAAGCCGTCTCGGCGGTGGCGCTGAATGTCGATAATCGGGTTCCTGCAACTGTAATCACTGGTTTCCTGGGTTCCGGAAAGACAACTCTCCTAAACCACATTCTAACTTCTCAACATGGCAAGCGGATTGCTGTCATAGAGAATGAGTTTGGGGAGGTGGATATCGATAGTTCATTGGTTGCTAGCCATTCCTCTGTTGCTGAGGACATTATTATGGTTAACAATGGCTGCTTATGTTGTACTGTTAGAGGAGATCTAGTTAAAATGCTTTTGGAGTTGGTTAAGAAGAAACGAGACAAGTTTGATCATATTGTCATAGAAACAACAGGTCTTGCAAAGCCTGCTCCTGTCATTGAAACATTCTGCACTGATGAATTGCTTTCACGATATGTGAAACTTGATGGTGTTGTTACCTTGGTTGACTGTAAGCATGCCATGCAGCATTTGGATGAAGTGAAACCCAGATTTGTCGTGAATGAGGCAGTAGAACAAGTTGCATACGCAGACCGTATCATTTTAAACAAGATAGATTTGGTGAGTGAGGCCGATTTGGAGGATTTGACTAAGAGAATTAAGCGTACCAATGGGATGGCACAAATCAAGCAAGCTAAATTTGGAGCTGTTGACATGGACTTTGTTTTAGGAGTTGGAGGATATGATCTCGATAGAATTGAATCTGAAGTTCAGGTAGATGGATCCCATGATTCAACCCATGAGCACGAGTCTGGGCATGAATACCAGAAAGGACATCACCATGATCATTTACATGATTCTGCTGTGTCCAGTGTCAGTATAGTTTCTGAGGGAACCCTTGATCTTGATGAGGTTGATGATTGGCTTGAAAGACTGATTGATGAAAAAGGGGACGACTTGTACAGGATGAAAGGGATTTTGTCCGTCAATGGTTCTGATGAGCGTTATGTTTTCCAGGGGGTCCATTCCACCTTGGATAGCTGCCCAGGCAAAACATGGGGAGGTGATGAGAAAAGGATAAACAAGCTTGTTTTCATAGGGAGGAGCTTGGATGAAGCTGCATTGAGGAAGGGTTTCAAAGGTTGTTTAGTGTGA | 1305 | 43.52 | MARKIFISRTAAKTLNQILRRPPSPSINSPWVSPSAVSQCLRPLHSFVSHLFHFRNMEIIQPCNSRCMVTCSIPHYDIVEAVSAVALNVDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDSSLVASHSSVAEDIIMVNNGCLCCTVRGDLVKMLLELVKKKRDKFDHIVIETTGLAKPAPVIETFCTDELLSRYVKLDGVVTLVDCKHAMQHLDEVKPRFVVNEAVEQVAYADRIILNKIDLVSEADLEDLTKRIKRTNGMAQIKQAKFGAVDMDFVLGVGGYDLDRIESEVQVDGSHDSTHEHESGHEYQKGHHHDHLHDSAVSSVSIVSEGTLDLDEVDDWLERLIDEKGDDLYRMKGILSVNGSDERYVFQGVHSTLDSCPGKTWGGDEKRINKLVFIGRSLDEAALRKGFKGCLV | 434 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01216 | 434 | SMART | CobW-C-3 | 339 | 433 | IPR011629 | - | |
| Eupl14g01216 | 434 | FunFam | GTP-binding protein YjiA | 90 | 299 | - | - | |
| Eupl14g01216 | 434 | Gene3D | - | 317 | 433 | IPR036627 | - | |
| Eupl14g01216 | 434 | CDD | CobW-like | 94 | 296 | - | - | |
| Eupl14g01216 | 434 | Pfam | CobW-HypB-UreG, nucleotide-binding domain | 94 | 279 | IPR003495 | - | |
| Eupl14g01216 | 434 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 92 | 309 | IPR027417 | - | |
| Eupl14g01216 | 434 | PANTHER | COBW-RELATED | 88 | 433 | IPR051316 | GO:0005737(PANTHER) | |
| Eupl14g01216 | 434 | SUPERFAMILY | Hypothetical protein YjiA, C-terminal domain | 339 | 433 | - | - | |
| Eupl14g01216 | 434 | Pfam | Cobalamin synthesis protein cobW C-terminal domain | 339 | 433 | IPR011629 | - | |
| Eupl14g01216 | 434 | MobiDBLite | consensus disorder prediction | 307 | 332 | - | - | |
| Eupl14g01216 | 434 | Gene3D | - | 90 | 298 | IPR027417 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01216 | K02234 | cobalamin biosynthesis protein CobW |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr11:11490097 | Eupl14g01216 | Eupl-Chr14:26769665 | dispersed | |
| Eupl | Eupl-Chr14:26769665 | Eupl9g01383 | Eupl-Chr9:27942761 | dispersed |