AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01230 ATGTCGTTGATTCTATCAGCAAATCAACTTGGGACACCTCAGATTCTCCAAACCCTAATTGCTTCTCATCGTCTTCGATCAAATCGGAGTGCTACATCGAAACGAGGCCATTTTAGAGGATTATCATCGAAGAAAGCTGGAATTCCGGGTTTAACGGGAGAGTTTTCTAGGATTCACTCCTCCAAATCCACTGAAAAATCCAACCAGACTAGCTCGGAAGTGAATTTGGAGTACAAGCAATGGTCAATTCTCCGAGCATGGGATGTCCCATGGGATTGGAAAGTTGTTTTATATGTTATGACCCCATACTTGATGAGCATTCTTTTGACAGGAATTGTGGAATCAGCAGGACTAGGAGTTCTGAAGTCCCAATCTGGAAATGTTCAAACCCACCTACAAAGCGTTGATGAAGAAGCGTTGCGATTATTAATTGATCAACTACTGAAAACAGTGATTAAGCTTTCAGTTCTCTATGTGTTTGTTAGTCCTTATCAACCTTTTCCAGAAGATATTTTTTCTTACAGATGGGCCAAACCATTTAACCTTCTGAATGGTTGGATTATATGGGGTATTGGAGGTCTAATAGTTGCATCAAGTACTGTTCTTCTTGTTAAGGCTTGTATATCTGGTCCAAGTGCTAGCCAGATGCAAAATGAGGCGGAATCTTTGGTCCGCTTGTTGCCGCTTATTGGTGCATCAAACATCAGCACTGCTTCTCTACTTGGCATCCTGGGAATTCTATCACCACTTTGTGAAGAGACACTGTATCGAGGTTTTCTCATGACATCCCTGACAAAATGGTTACCTGTACATTTATCTGTGGTTGTAAGCTCAGTTGTTTTTACCCTTGCACACCAATCTCCTGGGAAGTCTATAGAGATTTTCATATTTGGGATGGTACTGGGGCTGGTGTATGCTCAAACACGAAATCTTCTTGCTCCGATCACAATGCATGCATGTTGGAACCTTGGTGTCATATTCACACTGATATACTTTCAATCATATGTGTCTGCAGTCACAAGGGTACGATATCCAAAAGTATGTCCTCTGACTTGTATCACAAGGTGTAGTGGCGTCACTTGCCTTCTGCTCACTTCTGCAACCCTGGTCTCAGACCCTGCTAAGTTCTCATCTTTTGACTGA 1143 42.17 MSLILSANQLGTPQILQTLIASHRLRSNRSATSKRGHFRGLSSKKAGIPGLTGEFSRIHSSKSTEKSNQTSSEVNLEYKQWSILRAWDVPWDWKVVLYVMTPYLMSILLTGIVESAGLGVLKSQSGNVQTHLQSVDEEALRLLIDQLLKTVIKLSVLYVFVSPYQPFPEDIFSYRWAKPFNLLNGWIIWGIGGLIVASSTVLLVKACISGPSASQMQNEAESLVRLLPLIGASNISTASLLGILGILSPLCEETLYRGFLMTSLTKWLPVHLSVVVSSVVFTLAHQSPGKSIEIFIFGMVLGLVYAQTRNLLAPITMHACWNLGVIFTLIYFQSYVSAVTRVRYPKVCPLTCITRCSGVTCLLLTSATLVSDPAKFSSFD 380
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01230 380 PANTHER CAAX AMINO TERMINAL PROTEASE 29 332 - -
Eupl14g01230 380 Pfam Type II CAAX prenyl endopeptidase Rce1-like 238 323 IPR003675 GO:0004222(InterPro)|GO:0016020(InterPro)|GO:0071586(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01230 K07052 CAAX protease family protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:27281496 Eupl4g01061 Eupl-Chr4:16233881 dispersed
Eupl Eupl-Chr14:27281496 Eupl14g00295 Eupl-Chr14:3617534 transposed