AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01233 ATGGCTGGTCTACCGGCCTTCACCAAGCTTGGCCAGCATCTTCATCGCCTTGCTAACGGATGTACGATAGGTGACAGGATTAACATTTGGAAGGACAACTGGATCATTGGCCCACCTCCTTATCTCCTTCCTCCATCTCGACCTCCCGACTGCCAACTCTTTACCGTCAAGGACCTAATCCTTCCATCCCGCCAATGGAATCGTCCACTCATCTCCTCTCTATTTGAACAAAATGTCGCCAAGGCCAATAAGGATATCCCCCTTAGCAACACCCTGTTTATGGATCGCCTCTTCTGGCTGCCTCATCCTCAAGGAAAATTCACACTGAAACAGGCGTATCATTTACTCCAAGACTCTCTTGAGAACCTCTCTCAACCTCCACTTCCTAAGGAAGTTTGGCGAAAAGTTTGGACATTGCCCATCCCAAAGAGAGCTCAATTCTTTATATGGTGCCTATTGAGGAATATTCTCCCAACCAAAGCTATCCTGCACTCCAGAATACCTCAAATCCTCCCTCAATGTCCTCGATGTCAACATCATGAGGAGACTAGAGGCAGACGAGCTCAAGCCAAATCAGTCGAAGAAGCAGAAGTTGGAGCCTTGAAATGGGCTTTGGGAATGCTTAGGAGGATGGAGATCTCGGACATGATTGTAGAATCTGATGCAAAAATCGTGGTGGAGACACTTCAAAATGGATGCGACCTGCGACTCGACTCGACTCGACTCGCTATTCATGAGTCGTCCAACCTATGA 753 47.94 MAGLPAFTKLGQHLHRLANGCTIGDRINIWKDNWIIGPPPYLLPPSRPPDCQLFTVKDLILPSRQWNRPLISSLFEQNVAKANKDIPLSNTLFMDRLFWLPHPQGKFTLKQAYHLLQDSLENLSQPPLPKEVWRKVWTLPIPKRAQFFIWCLLRNILPTKAILHSRIPQILPQCPRCQHHEETRGRRAQAKSVEEAEVGALKWALGMLRRMEISDMIVESDAKIVVETLQNGCDLRLDSTRLAIHESSNL 250
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01233 250 PANTHER ZF-RVT DOMAIN-CONTAINING PROTEIN 23 185 - -
Eupl14g01233 250 Pfam zinc-binding in reverse transcriptase 107 184 IPR026960 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01233 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:27444950 Eupl5g01086 Eupl-Chr5:32837403 dispersed
Eupl Eupl-Chr14:27444950 Eupl4g01832 Eupl-Chr4:40320694 transposed