AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01248 ATGGGGGGTGGAAAGGACGAGCACGATAATTCAGAGTCGAGTGACAAAGGGCTCTTTTCAAACCTTGCATATGGGCTTGGTGGATATCCTCCTGGACACTATCCTCCACCACCCGGAGCATACCCTCCACAAGGCTACCCTCCACAGGGGTATCCCCCTCCTGGATATCCTCCTCAAGGATATCCCCCACAAGGCTATCCACCAGCAGGATACCCACCTCCTCCAGGATATCCCCCACAAGGCTATCCACCAGCAGGATACCCGCCGCCTCCAAGTGGATACCCACCATCCGGTTATCCAGGTCCATCTGCACCACCATATGCAGGGCATGGACCTAGCATGGGAACGATGCTAGCTGGGGGTGCTGCCGCGGCGGCTGCTGTTTATGGAGCCCACCAGCTCTCACATGGGGCTCATCATCTTGCACATGGGTCTTACTATGGGTATGGATCCCACAGACCGCATAAGTTCAAGCATCATGGCAAGTTCAAGCATGGGAAGTTTGGCAAGCGCTTTAAGCATGGGGGCAAGTTCATGAAGTTCAAGAAGTGGAAGTGA 558 54.84 MGGGKDEHDNSESSDKGLFSNLAYGLGGYPPGHYPPPPGAYPPQGYPPQGYPPPGYPPQGYPPQGYPPAGYPPPPGYPPQGYPPAGYPPPPSGYPPSGYPGPSAPPYAGHGPSMGTMLAGGAAAAAAVYGAHQLSHGAHHLAHGSYYGYGSHRPHKFKHHGKFKHGKFGKRFKHGGKFMKFKKWK 185
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01248 185 PRINTS Proline rich extensin signature 31 47 - -
Eupl14g01248 185 PRINTS Proline rich extensin signature 89 105 - -
Eupl14g01248 185 PRINTS Proline rich extensin signature 63 84 - -
Eupl14g01248 185 PRINTS Proline rich extensin signature 51 63 - -
Eupl14g01248 185 Pfam XYPPX repeat (two copies) 76 89 IPR006031 -
Eupl14g01248 185 Pfam XYPPX repeat (two copies) 55 69 IPR006031 -
Eupl14g01248 185 Pfam XYPPX repeat (two copies) 40 53 IPR006031 -
Eupl14g01248 185 MobiDBLite consensus disorder prediction 30 107 - -
Eupl14g01248 185 MobiDBLite consensus disorder prediction 1 108 - -
Eupl14g01248 185 PRINTS Molluscan rhodopsin C-terminal tail signature 42 53 - -
Eupl14g01248 185 PRINTS Molluscan rhodopsin C-terminal tail signature 55 67 - -
Eupl14g01248 185 PANTHER DOMAIN PROTEIN, PUTATIVE (AFU-ORTHOLOGUE AFUA-5G04290)-RELATED 1 73 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01248 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:27756367 Eupl8g01358 Eupl-Chr8:34698232 wgd