AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01258 ATGGCAACTGGATCCTCCAACTGGGGTCCATATATGGATGGACTGCCCTCAGATATTGACTCACCTGATATACAGTCGACACAAGAATGTCTACAAGATCATATGGATCTGAATTCACCAAATATACTGACGTCTACCCTGCATTCGACATCAGTCCCTTCCTCGGCAATAAACATTGAGGATGATACAGAAGTACAAGTTCAAGAAAAATGTCACAAGAAGCGTAAAGATTTGGACACTCGAGCTGAAATAGATGCCATTTTGAAGACGTTTGCCAAGGAAGTAGATGATAGACCCACTATCGAGGAGTGTGTACTATCTTTACGTGAGATGACAACATTATCTTCAACAGATCCCTTGTATTTTGTTGCAGTTACTGCTTTCTATGATAAGATAGAATATAGGCAAGGTGCCGTTGGTGGGATAGATGGAACTCTCGTCCATGCATGCATTCGAAAAGATAAACAAGTACTATATAGGGGTAGAGGATGGGGAGAATGTTACCAAAATGTCATGGCCATTTGTGACTTCAATATGATTTTTACTTATGTGGTGGCAGGATGGGAAGAGATTGCACATGATTCAAGAATTTTAAATGAAACGGTCCGTGAGCCATCCCACAAATTTTCAATTCCCCCTCATGACAAATATTATTTGGTAGATGCAGCTTACACGCATACGAGAGGTTTCATGGCACCATACAGCAACGTGCGGTATGGGTTTCCCGACTTTCAAAGTGGGGGTCACCCTAGAGGTAGAGAGGAAATCTTCAACTATGCACATGCCAAAATGAGAAATGTAATCGAACGAGCTTTTGGTGTGTTGAAGGCACGGTTCCCAATATTAAAGAGGATGTCGTCTTATTCTTTCCAAACACAACGAAACATAATCATTGCATGTATAGCGGTACACAACTATCTTCGAAAGGCGACAATTACAGATGATTTATTCTGTCAATATGATGATGAAGATGTCCAGCTTGAAGGTCCTAGTGTTCAGAATGGTGATACAACCAACATAGATGAATTATTTGGACAATCTGAACAAAGTTATATGATCAATTTGTGA 1068 40.45 MATGSSNWGPYMDGLPSDIDSPDIQSTQECLQDHMDLNSPNILTSTLHSTSVPSSAINIEDDTEVQVQEKCHKKRKDLDTRAEIDAILKTFAKEVDDRPTIEECVLSLREMTTLSSTDPLYFVAVTAFYDKIEYRQGAVGGIDGTLVHACIRKDKQVLYRGRGWGECYQNVMAICDFNMIFTYVVAGWEEIAHDSRILNETVREPSHKFSIPPHDKYYLVDAAYTHTRGFMAPYSNVRYGFPDFQSGGHPRGREEIFNYAHAKMRNVIERAFGVLKARFPILKRMSSYSFQTQRNIIIACIAVHNYLRKATITDDLFCQYDDEDVQLEGPSVQNGDTTNIDELFGQSEQSYMINL 355
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01258 355 PANTHER UNCHARACTERIZED 103 319 - -
Eupl14g01258 355 Pfam DDE superfamily endonuclease 170 305 IPR027806 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01258 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr11:31696667 Eupl14g01258 Eupl-Chr14:28120290 dispersed
Eupl Eupl-Chr14:28120290 Eupl4g02175 Eupl-Chr4:52056249 dispersed
Eupl Eupl-Chr14:28120290 Eupl11g01565 Eupl-Chr11:27421235 transposed