AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01260 ATGGCATTGTCTCTATTAAGTCAGCAACAGAGGACTTGTATTAGCCCTGTGGCATCACCCACACTGCCTTTGAGCTCTTCCTTCCGGGGCTCTCTGCTTTTCCCTCTTCAACACCACAATTCACTTGTCAAGGTCAAGGCTTCCTCCACTATTGTGTATCAGGGAGGAGGAGGAGGAGGATCATCCTACTGGCTTTCCACACTGCAAAATTCCAGTATCTTGCCATTCATTCAATTGCATTCCCTTCTTCAACCGCAGCTGGATCAGGGCAACAATGGCGGGAATGGACACAACAACAACAACAACAACAACAACAACAATGGCTGGAATCCCTTTGACTTCGAGGGATGGTGGAGTGGTGGTTCTCCTTTTCCTTCCCTCCTCTTTTTGTGCTCCCGTGTGCTTGGCTTCTGCTGCTCTGAGAGCGAGAAGACGAGTTCTATACACAGGGATGCCTTTCTCTTCCTCTTCTCTCTGTTGGGCTGCTTTTGGCATTTGCAATTGTTGTCAGCGCTTGCAAGAACTGCTCCTGATAATGATGACAACGATGAAGAGGTCGTTTGGGAAGTGAGAGGTGGCAAGTGGACCAGGCTCCTCCCACACTCTTCTAAGGATGCCTTTTTCATTGCTGGAACATCCACATCTACATTTACTTCCATTGGCGACGACAACGTTGTCAAGTCCTTATCCTTGCCCCTTGGATTGAATTTGTGGTCGCACTGCAGGGATCTCTTTTTGCAGCTAATGCTCCCAGAGGGTTATCCCCATAGCGTCAGCAGTGATTACTTGGAGTACTCTCTTTGGAGAGGGGTCCAAGGTGTTGCCAGCCAAATCAGCGGCGTCCTCTCCACCCAGGCTTTACTTTATGCCATTGGACTGGGGAAAGGTGCAATTCCGACAGCCGCTGCTGTCAACTGGGTACTTAAGGATGGAATTGGGTATCTCAGCAAAATTTTATTGTCAAAATATGGTCGCCATTTTGATGTGAATCCAAAGGGATGGAGGTTGTTTGCGGATCTTTTGGAAAACGGTGCTTACGGAATGGAGCTATTAACACCTGCATTTCCCCATCTATTTGTTTTAATTGGTGCAGCTGCTGGAGCAGGTCGATCAGCGGCTGCATTGATTCAGGCTGCTACTAGGAGCTGTTTTTATGCAGGCTTTGCTGCTCAAAGGAATTTTGCAGAGGTAATTGCAAAGGGTGAAGCTCAAGGAATGGTGAGCAAGTCTATTGGTATCATGCTTGGTATAGCATTAGCTAATTGCATTGGCGGCTCCACTCCTCTGGCTCTTGCTTCTTTTAGTGTGGTGACTGGGGTCCACATGTTCTGCAATCTGAAGTCATATCAATCCATTCAACTAAGGACTCTGAATCCATATCGTGCAAGTTTGGTCTTTAGTGAATATTTACTTAGTGGTCAAGTTCCTCCTATTAAAGAGGTGAATGACGAGGAACCACTCTTTCCCAGTCTGCAACTTAATAATGTTGACCTCATGTCTAAAGCACAATCACAAGTACTCTCTGTGGAAGCCAAAGATGCTGCAGCTCAAATTGAGCGCCGGCTGCAGCTGGGGTCCAAGCTTAGTGATGTTATCAACAGCAAGGAGGATGCATTTGCACTGTTTGATCTGTATAGAGACGAAGGCTACATGTTGACGGAGCACAGGGGAAGATTCTGTGTAATACTTAAAGAGGGTTCCTCGCCACAAGACATGCTCAAATCCTTGTTTCATGTCAACTATCTGTATTGGCTGGAGACAAACGTGGGCATTCAGTCGAGAAGTGCTGCAGATGACTGCAGGCCAGGAGGAAGGCTGCAAATATCTCTGGATTATGTGCAAAGGGAATTCAACCACATCAAACATGACGGGAATTTAGTTGGGTGGGTGACTGATGGGCTCATTGCAAGGCCATTACCTAACAGGATTCGCCCAGGTTATGCTGCCTCTGCTCCCACAAGTTGA 1965 47.23 MALSLLSQQQRTCISPVASPTLPLSSSFRGSLLFPLQHHNSLVKVKASSTIVYQGGGGGGSSYWLSTLQNSSILPFIQLHSLLQPQLDQGNNGGNGHNNNNNNNNNNGWNPFDFEGWWSGGSPFPSLLFLCSRVLGFCCSESEKTSSIHRDAFLFLFSLLGCFWHLQLLSALARTAPDNDDNDEEVVWEVRGGKWTRLLPHSSKDAFFIAGTSTSTFTSIGDDNVVKSLSLPLGLNLWSHCRDLFLQLMLPEGYPHSVSSDYLEYSLWRGVQGVASQISGVLSTQALLYAIGLGKGAIPTAAAVNWVLKDGIGYLSKILLSKYGRHFDVNPKGWRLFADLLENGAYGMELLTPAFPHLFVLIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEVIAKGEAQGMVSKSIGIMLGIALANCIGGSTPLALASFSVVTGVHMFCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQVPPIKEVNDEEPLFPSLQLNNVDLMSKAQSQVLSVEAKDAAAQIERRLQLGSKLSDVINSKEDAFALFDLYRDEGYMLTEHRGRFCVILKEGSSPQDMLKSLFHVNYLYWLETNVGIQSRSAADDCRPGGRLQISLDYVQREFNHIKHDGNLVGWVTDGLIARPLPNRIRPGYAASAPTS 654
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01260 654 PANTHER RUS1 FAMILY PROTEIN C16ORF58 183 644 IPR006968 GO:0009941(PANTHER)|GO:0010224(PANTHER)|GO:0032502(PANTHER)
Eupl14g01260 654 Pfam Vitamin B6 photo-protection and homoeostasis 238 471 IPR054549 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01260 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:28196102 Eupl13g00120 Eupl-Chr13:1646604 transposed