AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01261 ATGACAGAGAGTAGAGATGGAACTGGAGGCGATAAAGTTTCAAAGTCCTCAAATGCTAGCTCTCTTCCACTTATTCTCGACATAGACGACTTTAAGGGTGATTTCTCATTTGATGCGTTGTTTGGGAACTTGGTGAATGACCTCCTCCCATCATTTCAAGAAGAAGACACAGATTCATCGGAGGGTACTGGTGGAAATGATGGTTTACCGAATGGGCATTTGCGGGTTCCATCTGACATGGCAAAAGCAGCACAAGGACCATTCAGTCCACTATTTCCAGAAGTAGATGCTCTCTTGTCCTTGTTTAAGGATTCTTGTAGGGAGTTGATTGATCTTCGACAACAAATCGATGCAAGACTGTACAATCTCAAGAGGGAGGTTTCTATCCAAGATTCCAAGCACCGTAAGACGCTTTCTGAGCTGGAGAAAGGTGTAGATGGCCTATTTGATAGCTTTGCCAGGCTGGATTCGCGTATCTCTAGTGTTGGACAGACTGCTGCTAAAATTGGAGATCATCTGCAGAGTGCAGATTCTCAGAGAGATACTGCAAGTCAAACGATAGAGCTCATAAAGTACTTGATGGAGTTTAATAGCAGCCCAGGGGATCTAATAGAACTTTCACCTCTATTTTCTGATGACAGTCATGTTGCTGAGGCTGCTTCAATTGCACAAAAATTGCGGGCATTTGCTGAGGAGGATATTGGAAGACATGGCATAACCGTGCCATCAATTATGGGAAATGCAACCGCAAGCAGAGGCTTAGAAGTTGCGGTTGAAAATCTTCAAGACTATTGCAATGAACTGGAGAATAGATTGTTGACTCGGTTTGATGCAGCATCACAGAGGCGCGAATTGTCAACAATGGCAGAATGTGCTAAAATTTTGTCTCAGTTTAACAGGGGTACAAGTGCAATGCAACATTATGTGAGAACTCGACCAATGTTTATGGATGTAGAGGTAATGAATGCAGACACCAGGTTGGTTCTTGGTGATCAGGGATCACAAGCTAGTCCTAGCAATGTTGCACGTGGACTTTCTTCATTGTACAAAGAAATCACAGATACTGTGAGAAAAGAAGCTGCAACAATAATGGCTGTATTCCCTTCTTCTAATGATGTCATGGCAATCCTGGTGCAGAGAGTTTTGGAGCAGCGTGTGACGGCCCTCCTGGACAAGCTTTTAGTGAAGCCATCTCTTGTGAACTTACCTCCTGTTGAACAAGGCGGACTTCTATTATATCTTAGAATTCTAGCTGTGACATATGAGAAGACACAGGAACTTGCTAGAGACTTACGAGCTGTGGGGTGCGGTGACTTGGATGTTGAGGGCCTCACAGAGTCTCTGTTTCTTGCTCACCAAGACGAGTATCCTGAACATGAGCAGGCGTCCCTCAGACAACTCTATCATGCAAAGATGGAAGAATTGCGTGCTGAAAGCCAGCAGCAATCTGAATCTACTGGGACAATTGGACGCTCGAAAGCGGCTTCCATGACATCTTCACACCAGCAAATATCTGTGACTGTAGTGACAGAGTTTGTGCGTTGGAATGAAGAGGCAATATCTAGATGCTCTTTGTTTTCTTCTCAGCCTGCTACTCTTGCAACCAACGTAAAAGCAGTATTCACTTGCTTGCTCGATCAAGTTAGCCAATATATAACAGAAGGACTTGAACGGGCTAGAGATGGTCTGAATGAAGCTGCAGCTTTGAGGGAAAGGTTTGTGCTGGGCACAATTGTTAGTAGAAGAGTTGCTGCTGCGGCTGCTTCTGCTGCAGAAGCGGCTGCTGCAGCTGGTGAAAGCAGTTTCAGATCTTTCATGGTGGCTGTACAACGTTGTGGTAGCAGTGTGGCTGTTGTCCAGCAATATTTTACAAACTCTATTTCTCGGCTTTTACTACCTGTGGATGGTGCGCATGCTGCATCCTGTGAAGAAATGGCAACTGCTATGTCCAGTGCAGAGGGTGCTGCTTATAAAGGGCTTCAACAATGCATTGAAACTGTGATGGCTGAGGTAGAACGATTGCTGTCTGCTGAGCAGAAGCCAACAGATTATCGGTCACCGGATGATGGAATTGCTCCTGATCATCGTCCAACAAATGCTTGCACAAGAGTTGTCGCATATCTCTCCCGTGTCCTTGAGGTTGCATTCACTGCACTGGAAGGTCTAAACAAACAAGCTTTCCTGACTGAATTGGGAAACCGCTTGCACAAGGGGCTACTTAACCATTGGCAGAAGTACACATTTAACCCCAGTGGTGGGCTTCGTTTGAAGCGTGACATTACTGAGTATGGGGAGTTCGTGCGCAGCTTCAATGCTCCCTCGGTCGATGAGAAATTCGAATTGTTGGGCATTATGGCCAATGTCTTCATTGTTGCACCTGAGAGCCTATCCACTTTGTTTGAGGGATCCCCGAGTATCCGCAAAGATGCACAGAGGTTCATTCAGCTTAGAGAGGACTACAAGTCTGCGAAGCTTGCAGCCAGGCTCAGCTCCATGTGGCCAAGTTCTAGTTAA 2514 45.66 MTESRDGTGGDKVSKSSNASSLPLILDIDDFKGDFSFDALFGNLVNDLLPSFQEEDTDSSEGTGGNDGLPNGHLRVPSDMAKAAQGPFSPLFPEVDALLSLFKDSCRELIDLRQQIDARLYNLKREVSIQDSKHRKTLSELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADSQRDTASQTIELIKYLMEFNSSPGDLIELSPLFSDDSHVAEAASIAQKLRAFAEEDIGRHGITVPSIMGNATASRGLEVAVENLQDYCNELENRLLTRFDAASQRRELSTMAECAKILSQFNRGTSAMQHYVRTRPMFMDVEVMNADTRLVLGDQGSQASPSNVARGLSSLYKEITDTVRKEAATIMAVFPSSNDVMAILVQRVLEQRVTALLDKLLVKPSLVNLPPVEQGGLLLYLRILAVTYEKTQELARDLRAVGCGDLDVEGLTESLFLAHQDEYPEHEQASLRQLYHAKMEELRAESQQQSESTGTIGRSKAASMTSSHQQISVTVVTEFVRWNEEAISRCSLFSSQPATLATNVKAVFTCLLDQVSQYITEGLERARDGLNEAAALRERFVLGTIVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRCGSSVAVVQQYFTNSISRLLLPVDGAHAASCEEMATAMSSAEGAAYKGLQQCIETVMAEVERLLSAEQKPTDYRSPDDGIAPDHRPTNACTRVVAYLSRVLEVAFTALEGLNKQAFLTELGNRLHKGLLNHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGSPSIRKDAQRFIQLREDYKSAKLAARLSSMWPSSS 837
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01261 837 Coils Coil 251 271 - -
Eupl14g01261 837 Pfam Exocyst complex component Sec10, N-terminal 96 212 IPR048625 -
Eupl14g01261 837 Pfam Exocyst complex component Sec10-like, alpha-helical bundle 485 826 IPR048627 -
Eupl14g01261 837 Pfam Exocyst complex component Sec10-like, alpha-helical bundle 218 483 IPR048627 -
Eupl14g01261 837 MobiDBLite consensus disorder prediction 476 496 - -
Eupl14g01261 837 MobiDBLite consensus disorder prediction 479 496 - -
Eupl14g01261 837 PANTHER SEC10 16 823 IPR009976 GO:0000145(PANTHER)|GO:0005737(InterPro)|GO:0006887(PANTHER)|GO:0006893(PANTHER)
Eupl14g01261 837 MobiDBLite consensus disorder prediction 53 77 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01261 K19984 exocyst complex component 5
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:28245906 Eupl9g01335 Eupl-Chr9:26801538 dispersed