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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01281 ATGCTTGTCATTGACTTTCATATTCGTAGAACATCCTATCTTTCTAACACTGATTGTGGTGATGACTCTCCACAGTTGCTTGTAGTGCAAGAGAAGCACTGCACTCTGGCATTTGTTGGTGTTTGGAAGTTGCCTACTGGTTTCATTCTTGAGTCCGAGGAGATCTTTACGGGAACTGTAAGAGAAGTTAAGGAGGAAATTGTCTTGTATAAATTTATCAGGCATGGTCACCATGTGGCTTTTGAAAAGTCAGATTTGTTCTTCATTTGCGTGCTAAGACCTCTATCAACTCAGATCAAAGTAGATGACCTAGAAATTCAAGCTGCTAAGTCCATGAATGCTTTCCCGATGATGTTTACTCGGCTCAGCGAGGAGGTAAAGGCACTACAAGCTGAGAAAGTTGCTCTCAAAGCCGAGGTTATGGCTCTCAAGGCGAAGGAGAAAGAGATTTTTGCTCAAAACGAGTAG 468 42.31 MLVIDFHIRRTSYLSNTDCGDDSPQLLVVQEKHCTLAFVGVWKLPTGFILESEEIFTGTVREVKEEIVLYKFIRHGHHVAFEKSDLFFICVLRPLSTQIKVDDLEIQAAKSMNAFPMMFTRLSEEVKALQAEKVALKAEVMALKAKEKEIFAQNE 155
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01281 155 PANTHER NUDIX HYDROLASE RELATED 22 115 IPR003293 GO:0035529(PANTHER)|GO:0047631(PANTHER)|GO:0051287(PANTHER)
Eupl14g01281 155 Pfam NUDIX domain 25 110 IPR000086 -
Eupl14g01281 155 Coils Coil 119 146 - -
Eupl14g01281 155 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 19 141 - -
Eupl14g01281 155 SUPERFAMILY Nudix 21 112 IPR015797 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01281 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:29234422 Eupl8g00809 Eupl-Chr8:23165270 dispersed
Eupl Eupl-Chr14:29208163 Eupl14g01281 Eupl-Chr14:29234422 tandem