AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01302 ATGGAGTTCACTGAGGCTTATAAGCACACTGGTCCATATTGTTTCTCGCCAAATTCCCAGTATCTTGCGGTTGCAGTCGACTATCGCCTGGTGATCCGAGATGTTCTCTCCCTCAAGGTCGTACAATTGTTTTCATGCTTGGATAAGATAAGCTATATTGAATGGGCTCTCGACTCTGAGTACATACTATGTGGTCTTTATAAGAGACCAATGATACAGGCATGGTCATTGACCCAGCCTGAATGGACATGCAAAATAGATGAAGGCCCTGCTGGGATTGCTTATGCAAGATGGAGCCCTGACAGTCGCCACATTCTTACAACATCAGATTTCCAGTTGCGACTAACAGTTTGGTCACTGGTGAACACAGCCTGTATACATGTGCAATGGCCAAAGCATGCCTCTAAGGGTGTTTCTTTTACCCAAGATGGAAAGTTTGCTGCTATCTGTACAAGGCGTGACTGTAAAGACTACATTAATCTCCTGTCTTGTCATACATGGGAGATCATGGGTGTTTTTGCTGTTGACACATTGGATTTAGCTGATATTGAATGGTCACCAGATGATAGTGCTATAGTGATCTGGGATTCTCCTCTTGAGTATAAGGTTCTGATTTATTCTCCAGACGGGAGATGTCTATTTAAGTATCAAGCATATGAAAGCGCATTGGGTGTAAAAAGTGTTGCATGGTCCCCTTGTGGCCAGTTTCTAGCAGTGGGTAGTTATGACCAGATGTTACGGGTTTTGAATCACCTGACGTGGAAAACATTTGCTGAGTTCATGCACCTATCCACTGTTCGTGGTCCTTGCAGTGCTGCTGTGTTCAAGGAGGTTGATGAGCCTTTGCAGCTCGATATGTCGGGATTATGTTTGAGTGACGAGTTCATGAAAGGGAACTCTGATAATGCTCCAGAGGGACCCTTCAGAGTCAGGTACAAAGTAATGGAATTACCCATTATCTTGCCGTCTCAGAAGCCTCCTGCAGACAAACCAAACCCTAAACAAGGCGTTGGTCTTTTGGCATGGAGCAATGACAGACAGTATCTTTTCACTCGTAACGACAGCATGCCAACTGTTCTCTGGATATGGGACATCCGCCATCTCGAGCTCGCTGCCATCCTAGTGCAGAAAGAGCCTATTCGTGCAGCAGCATGGGATCCAACATACCCACGTCTTGTTCTATGCACCAGTAGCTCTCACTTGTACATGTGGACCCCCTCTGGTGCCTACTGTGTGAGTATTCCGTTGCCGCAGTTTTCCATTACAGATCTGAAATGGAATTCAGATGGGACCTGCCTTCTTCTCAAGGACCGAGAGTCATTCTGCTGTGCTGCAGTGCCCATGCTGCCAGATTCCAGTGAAGATAGCTCAGACAATTAA 1380 46.01 MEFTEAYKHTGPYCFSPNSQYLAVAVDYRLVIRDVLSLKVVQLFSCLDKISYIEWALDSEYILCGLYKRPMIQAWSLTQPEWTCKIDEGPAGIAYARWSPDSRHILTTSDFQLRLTVWSLVNTACIHVQWPKHASKGVSFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLFKYQAYESALGVKSVAWSPCGQFLAVGSYDQMLRVLNHLTWKTFAEFMHLSTVRGPCSAAVFKEVDEPLQLDMSGLCLSDEFMKGNSDNAPEGPFRVRYKVMELPIILPSQKPPADKPNPKQGVGLLAWSNDRQYLFTRNDSMPTVLWIWDIRHLELAAILVQKEPIRAAAWDPTYPRLVLCTSSSHLYMWTPSGAYCVSIPLPQFSITDLKWNSDGTCLLLKDRESFCCAAVPMLPDSSEDSSDN 459
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01302 459 Gene3D - 135 281 IPR015943 GO:0005515(InterPro)
Eupl14g01302 459 PANTHER WD REPEAT PROTEIN 8-RELATED 1 450 IPR052778 GO:0005815(PANTHER)|GO:0072686(PANTHER)|GO:1990810(PANTHER)|GO:1990811(PANTHER)
Eupl14g01302 459 SUPERFAMILY WD40 repeat-like 14 437 IPR036322 GO:0005515(InterPro)
Eupl14g01302 459 Gene3D - 7 134 IPR015943 GO:0005515(InterPro)
Eupl14g01302 459 Gene3D - 321 444 IPR015943 GO:0005515(InterPro)
Eupl14g01302 459 SMART WD40-4 367 405 IPR001680 GO:0005515(InterPro)
Eupl14g01302 459 SMART WD40-4 209 250 IPR001680 GO:0005515(InterPro)
Eupl14g01302 459 SMART WD40-4 77 119 IPR001680 GO:0005515(InterPro)
Eupl14g01302 459 Pfam WD domain, G-beta repeat 210 248 IPR001680 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01302 K25164 WD repeat-containing protein WRAP73