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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01305 ATGGAACGCAATCAAAGAATCAAAATCGTTATAGGCTTAATCTCTGCAACTTCTCTGATCATTCTCTTGTGTGTGATCTACTTCTGCCGCAAAAAACCCGCCAAAGATGTGTCCGTGGAGATGGGAGACTTCGAATGTAAAGAAGAGGTTGAGATCAAAAAAGAGGATTTGATCAGTTTTCCAGGTGGTGAGAATCTCACCGTCCATGATATCTTGGATGCTCCGGGAGAGGTGACCGGGAAATCGAACCACGGAACACTGTATAAGGCGTGTTTAGAGAGACACAATTCGGTGGTGGTGCTTCGGTTTCTCCGTCCGGCGTCCACCGGGGGGATGAAGGAGATTCTACCTGTAATTCAGATGCTAGGGTTTATTAGACATCCTAATTTGGTACCTCTTCGAGCTTTTTATGCCGGCCCGAGAGGGGAGCAGCTTCTTGTTCATCCGTTCTTCAGCCGGGGCGCTCTTGTGCAGTTTCTTCGAGATGGAAATGGTGAATCACACAAGTGGGCTGTTATTTATAGGGTCTCCATCGGTATCGTTAAAGGATTGGATCATCTCCACACTGGATTGCAGAAACCCATTATCCATGGAAACCTCAAGTCGAAGAACATATTATTGGATGTAAATTACCATCCGTATGTGTCAGATTTCGGCCTACATCTCCTCTTGAATCCAACAGCGGGCCAAGAAATGCTTGAAGCTTCTGCGACTCAGGGATACAAAGCACCGGAGCTGATCAAGATGAAGGATGCGAGTGAAGAGAGTGACATCTACAGCCTTGGGATCATCTTGCTTGAAATACTTACTGGGAAGGAGGCCATTAATGGGAACCCATCCCCAACTCAGGATCTAAGTCTGTCAAACTCCATGAGAAATGCAATCCTTGATCATAGAATCTCGGATATATTTCATCCTGATATACTTCTCAGTCAGAGCAATCATCAAAACCCAGTTACTGAAGAACATCTGCTCATGTTCTTTCAGCTGGCAATGGCTTGTTGTTCTCCTTCTCCATCTTTGAGACCGGATATCAAGCAAGTTCTCAAGAAGCTCGAAGAAATTGGACAATAA 1074 45.25 MERNQRIKIVIGLISATSLIILLCVIYFCRKKPAKDVSVEMGDFECKEEVEIKKEDLISFPGGENLTVHDILDAPGEVTGKSNHGTLYKACLERHNSVVVLRFLRPASTGGMKEILPVIQMLGFIRHPNLVPLRAFYAGPRGEQLLVHPFFSRGALVQFLRDGNGESHKWAVIYRVSIGIVKGLDHLHTGLQKPIIHGNLKSKNILLDVNYHPYVSDFGLHLLLNPTAGQEMLEASATQGYKAPELIKMKDASEESDIYSLGIILLEILTGKEAINGNPSPTQDLSLSNSMRNAILDHRISDIFHPDILLSQSNHQNPVTEEHLLMFFQLAMACCSPSPSLRPDIKQVLKKLEEIGQ 357
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01305 357 Gene3D Transferase(Phosphotransferase) domain 1 152 357 - -
Eupl14g01305 357 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Eupl14g01305 357 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 356 IPR052451 -
Eupl14g01305 357 Pfam Protein kinase domain 80 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Eupl14g01305 357 SUPERFAMILY Protein kinase-like (PK-like) 77 353 IPR011009 -
Eupl14g01305 357 Gene3D Phosphorylase Kinase; domain 1 79 151 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01305 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:30015435 Eupl7g00575 Eupl-Chr7:17540095 dispersed
Eupl Eupl-Chr14:30015435 Eupl8g00796 Eupl-Chr8:22613356 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Eupl11g00282 . 1 460 Carbohydrate Esterase gene family AT3G27320 70.346 0.0 656.0
Eupl11g01043 . 17 554 Carbohydrate Esterase gene family AT1G23200 54.281 0.0 566.0
Eupl2g01292 . 21 324 Carbohydrate Esterase gene family AT1G24793 56.026 9.98e-127 363.0
Eupl5g00301 . 28 341 Carbohydrate Esterase gene family AT5G16080 35.362 2.46e-55 182.0
Eupl5g00302 . 28 341 Carbohydrate Esterase gene family AT5G16080 35.072 2.16e-55 182.0
Eupl4g01472 . 36 427 Carbohydrate Esterase gene family AT5G15860 73.791 0.0 609.0
Eupl3g01273 . 1 325 Carbohydrate Esterase gene family AT3G48700 49.846 1.15e-108 321.0
Eupl3g01297 . 68 729 Carbohydrate Esterase gene family AT5G36210 71.622 0.0 1007.0
Eupl4g01981 . 1 326 Carbohydrate Esterase gene family AT3G48700 46.224 6.43e-96 286.0
Eupl4g01980 . 3 330 Carbohydrate Esterase gene family AT3G48700 38.438 8.14e-68 213.0
Eupl9g00238 . 1 357 Carbohydrate Esterase gene family AT5G47500 44.18 1.71e-105 313.0
Eupl3g00638 . 41 551 Carbohydrate Esterase gene family AT5G09760 63.938 0.0 671.0
Eupl5g00689 . 217 295 Carbohydrate Esterase gene family AT3G43270 49.367 9.82e-18 75.5
Eupl2g00479 . 57 173 Carbohydrate Esterase gene family AT1G25141 27.869 1.30e-07 50.4
Eupl2g00543 . 1 380 Carbohydrate Esterase gene family AT5G55590 56.053 3.34e-143 409.0
Eupl8g01325 . 7 395 Carbohydrate Esterase gene family AT4G19420 70.694 0.0 616.0
Eupl1g01395 . 84 388 Carbohydrate Esterase gene family AT1G05310 57.705 1.22e-131 383.0
Eupl13g01540 . 395 423 Carbohydrate Esterase gene family AT3G05610 68.966 1.53e-08 48.1
Eupl13g01538 . 239 295 Carbohydrate Esterase gene family AT3G43270 56.14 7.44e-15 66.2
Eupl13g01537 . 137 289 Carbohydrate Esterase gene family AT1G53830 33.125 1.32e-16 73.9
Eupl3g01910 . 60 359 Carbohydrate Esterase gene family AT5G47500 42.193 5.16e-80 261.0
Eupl3g01638 . 5 559 Carbohydrate Esterase gene family AT2G47550 57.244 0.0 629.0
Eupl6g00581 . 1 557 Carbohydrate Esterase gene family AT1G11580 58.571 0.0 655.0
Eupl6g00580 . 1 557 Carbohydrate Esterase gene family AT1G11580 54.821 0.0 609.0
Eupl1g00187 . 28 319 Carbohydrate Esterase gene family AT5G16080 35.275 2.11e-49 167.0
Eupl13g01383 . 40 551 Carbohydrate Esterase gene family AT5G09760 66.926 0.0 712.0
Eupl4g01793 . 61 224 Carbohydrate Esterase gene family AT1G53830 28.07 1.76e-16 75.5
Eupl4g01140 . 59 362 Carbohydrate Esterase gene family AT5G47500 37.261 6.18e-67 212.0
Eupl4g00614 . 48 199 Carbohydrate Esterase gene family AT4G15980 28.302 1.04e-07 48.9
Eupl4g00414 . 1 460 Carbohydrate Esterase gene family AT3G27320 72.025 0.0 684.0
Eupl6g01345 . 285 308 Carbohydrate Esterase gene family AT3G09410 75.0 2.21e-06 45.1
Eupl6g00240 . 10 380 Carbohydrate Esterase gene family AT5G55590 57.412 1.15e-147 420.0
Eupl9g00656 . 52 219 Carbohydrate Esterase gene family AT3G14310 33.136 2.55e-20 86.3
Eupl9g00713 . 13 370 Carbohydrate Esterase gene family AT3G14310 62.327 1.57e-138 404.0
Eupl9g00712 . 10 297 Carbohydrate Esterase gene family AT3G43270 53.287 4.43e-97 293.0
Eupl9g00711 . 29 318 Carbohydrate Esterase gene family AT2G26440 61.034 8.81e-116 343.0
Eupl9g00710 . 2 343 Carbohydrate Esterase gene family AT4G02330 40.571 1.74e-70 228.0
Eupl9g00709 . 1 378 Carbohydrate Esterase gene family AT4G33230 40.731 3.53e-85 268.0
Eupl9g00708 . 5 351 Carbohydrate Esterase gene family AT3G10710 48.056 3.74e-105 318.0
Eupl9g00707 . 1 361 Carbohydrate Esterase gene family AT1G53840 53.022 1.36e-117 357.0
Eupl9g00706 . 46 356 Carbohydrate Esterase gene family AT5G53370 32.051 1.34e-35 134.0
Eupl9g00674 . 51 583 Carbohydrate Esterase gene family AT1G53830 46.225 3.52e-164 479.0
Eupl9g00673 . 48 219 Carbohydrate Esterase gene family AT1G53830 25.0 3.09e-14 70.9
Eupl8g00974 . 95 213 Carbohydrate Esterase gene family AT3G14310 27.731 3.11e-06 42.7
Eupl8g00975 . 75 197 Carbohydrate Esterase gene family AT5G53370 29.104 4.98e-06 43.9
Eupl8g00977 . 36 127 Carbohydrate Esterase gene family AT4G02320 34.783 1.65e-06 45.8
Eupl14g00829 . 59 219 Carbohydrate Esterase gene family AT3G14310 26.994 2.92e-20 86.3
Eupl14g00830 . 38 213 Carbohydrate Esterase gene family AT3G14310 27.528 5.59e-20 85.5
Eupl14g00831 . 62 224 Carbohydrate Esterase gene family AT1G53830 28.221 1.37e-20 87.4
Eupl14g00833 . 58 210 Carbohydrate Esterase gene family AT3G05610 31.013 1.44e-17 78.6
Eupl14g00834 . 59 216 Carbohydrate Esterase gene family AT3G14310 30.0 1.14e-19 84.7
Eupl14g00835 . 62 151 Carbohydrate Esterase gene family AT1G53830 30.0 1.04e-10 58.5
Eupl14g00836 . 59 216 Carbohydrate Esterase gene family AT3G14310 27.044 1.29e-19 84.3
Eupl14g00850 . 10 518 Carbohydrate Esterase gene family AT3G60730 56.53 0.0 576.0
Eupl14g00851 . 1 409 Carbohydrate Esterase gene family AT2G45220 61.137 0.0 520.0
Eupl14g00852 . 8 511 Carbohydrate Esterase gene family AT2G45220 68.085 0.0 731.0
Eupl10g00966 . 110 357 Carbohydrate Esterase gene family AT5G47500 52.823 1.70e-92 275.0
Eupl8g00282 . 1 598 Carbohydrate Esterase gene family AT3G49220 64.474 0.0 786.0
Eupl13g00268 . 54 359 Carbohydrate Esterase gene family AT5G47500 42.071 2.06e-88 268.0
Eupl13g00367 . 16 358 Carbohydrate Esterase gene family AT5G47500 44.598 9.04e-105 311.0
Eupl13g00533 . 3 329 Carbohydrate Esterase gene family AT3G48700 49.848 8.97e-109 319.0
Eupl13g00534 . 193 315 Carbohydrate Esterase gene family AT3G48700 43.902 2.20e-27 102.0
Eupl13g00535 . 1 332 Carbohydrate Esterase gene family AT3G48700 48.358 1.61e-105 311.0
Eupl10g01312 . 10 526 Carbohydrate Esterase gene family AT3G43270 62.741 0.0 691.0
Eupl10g01311 . 29 547 Carbohydrate Esterase gene family AT2G26440 65.896 0.0 704.0
Eupl10g01309 . 1 249 Carbohydrate Esterase gene family AT1G53840 47.791 8.35e-66 212.0
Eupl10g01287 . 9 361 Carbohydrate Esterase gene family AT1G69940 52.113 2.57e-129 373.0
Eupl10g01273 . 54 216 Carbohydrate Esterase gene family AT3G14310 30.488 4.31e-17 77.0
Eupl14g00172 . 1 598 Carbohydrate Esterase gene family AT3G49220 64.111 0.0 782.0
Eupl14g00446 . 6 403 Carbohydrate Esterase gene family AT5G23870 66.089 0.0 555.0
Eupl1g00417 . 6 284 Carbohydrate Esterase gene family AT2G41530 83.513 0.0 503.0
Eupl5g01240 . 276 468 Carbohydrate Esterase gene family AT2G26440 46.632 4.60e-60 194.0
Eupl6g01732 . 67 389 Carbohydrate Esterase gene family AT1G05310 71.296 0.0 506.0
Eupl14g01305 . 63 359 Carbohydrate Esterase gene family AT5G61570 58.576 3.30e-125 362.0
Eupl7g01760 . 2 415 Carbohydrate Esterase gene family AT3G05910 69.88 0.0 636.0
Eupl7g01783 . 30 135 Carbohydrate Esterase gene family AT3G16970 31.776 3.42e-11 58.2
Eupl7g01785 . 26 130 Carbohydrate Esterase gene family AT3G16970 34.259 3.36e-14 63.2
Eupl10g00540 . 28 339 Carbohydrate Esterase gene family AT5G16080 37.421 5.38e-70 219.0
Eupl10g00542 . 28 344 Carbohydrate Esterase gene family AT5G16080 36.533 7.45e-67 211.0
Eupl3g02327 . 485 621 Carbohydrate Esterase gene family AT5G36210 29.371 2.53e-06 48.9
Eupl8g00796 . 47 359 Carbohydrate Esterase gene family AT5G61570 55.521 5.19e-123 357.0
Eupl1g01768 . 1 427 Carbohydrate Esterase gene family AT3G09410 60.981 0.0 557.0
Eupl14g00664 . 41 342 Carbohydrate Esterase gene family AT5G16080 34.824 3.47e-54 179.0
Eupl14g00661 . 23 307 Carbohydrate Esterase gene family AT1G68620 36.12 1.47e-46 159.0
Eupl14g00659 . 36 302 Carbohydrate Esterase gene family AT1G68620 36.786 1.22e-48 164.0
Eupl14g00658 . 58 329 Carbohydrate Esterase gene family AT1G68620 39.643 1.52e-53 177.0
Eupl14g00657 . 58 324 Carbohydrate Esterase gene family AT1G68620 39.636 1.89e-53 177.0
Eupl7g01048 . 2 325 Carbohydrate Esterase gene family AT3G48700 45.015 7.14e-99 294.0
Eupl7g01430 . 6 572 Carbohydrate Esterase gene family AT4G02330 61.092 0.0 704.0
Eupl7g01431 . 7 543 Carbohydrate Esterase gene family AT3G05620 60.846 0.0 661.0
Eupl7g01432 . 33 518 Carbohydrate Esterase gene family AT4G02320 56.627 0.0 570.0
Eupl7g01572 . 31 330 Carbohydrate Esterase gene family AT2G19150 39.159 2.39e-69 218.0
Eupl7g01615 . 61 357 Carbohydrate Esterase gene family AT5G47500 47.138 8.29e-95 286.0
Eupl12g00575 . 27 135 Carbohydrate Esterase gene family AT3G16970 30.252 1.90e-11 56.6
Eupl12g00664 . 493 695 Carbohydrate Esterase gene family AT5G36210 26.267 8.09e-17 83.2
Eupl12g00508 . 145 218 Carbohydrate Esterase gene family AT5G55590 48.649 4.63e-16 68.6
Eupl11g01386 . 19 342 Carbohydrate Esterase gene family AT5G16080 54.217 7.06e-124 358.0
Eupl3g00312 . 30 135 Carbohydrate Esterase gene family AT3G16970 34.906 7.28e-17 70.1
Eupl3g00311 . 30 136 Carbohydrate Esterase gene family AT3G16970 27.103 6.45e-09 49.3
Eupl14g00952 . 7 362 Carbohydrate Esterase gene family AT5G47500 71.547 0.0 540.0
Eupl12g01240 . 39 336 Carbohydrate Esterase gene family AT2G19150 47.841 3.23e-91 284.0
Eupl12g01238 . 82 388 Carbohydrate Esterase gene family AT1G05310 39.032 7.82e-72 227.0
Eupl12g01219 . 49 208 Carbohydrate Esterase gene family AT5G49180 25.153 4.35e-08 51.2
Eupl12g01015 . 46 214 Carbohydrate Esterase gene family AT3G05610 27.586 5.10e-19 82.4
Eupl12g00987 . 75 223 Carbohydrate Esterase gene family AT5G53370 26.846 1.94e-10 57.0
Eupl12g00984 . 11 566 Carbohydrate Esterase gene family AT3G05610 56.46 0.0 695.0
Eupl12g00983 . 4 578 Carbohydrate Esterase gene family AT1G02810 59.483 0.0 698.0
Eupl12g01345 . 16 565 Carbohydrate Esterase gene family AT3G05610 44.956 3.53e-174 506.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Eupl Pkinase 7.8e-29 CL0016 PK RLK-Pelle_LRR-III