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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01315 ATGTGGTATTTAAACATAGATGGAGCTTTAACCAATAATAGAGCTGGGTATGGGTACATCATTAGAGATTGGAGAGGAAGGCCTTTGGTGGGAGGAGCAGTGGGAGGAGCCGGTGGGTGTAGACCTTTTAATATTCTCTTTCATGAGCTTATAGCCATATACAAGGGAATGAAATGCGCAGCTGAGAGAGGATTAGCGAAGCTTAAAGTGGTGTCCGATTCTAAAGTGGTGATTGACTGCATTAACAAGAAAATTGCATGGCCTTGGCAAGTTTCTTTTGATCTCCATCGGATGCTTATTTGGTCCAGTCCTTTGACATCGTTACCTTCCATTTTTCTTATAGAGAGACCAATCGTGTAG 360 42.5 MWYLNIDGALTNNRAGYGYIIRDWRGRPLVGGAVGGAGGCRPFNILFHELIAIYKGMKCAAERGLAKLKVVSDSKVVIDCINKKIAWPWQVSFDLHRMLIWSSPLTSLPSIFLIERPIV 119
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01315 119 CDD RNase-H-like 4 103 IPR044730 -
Eupl14g01315 119 Gene3D - 2 103 IPR036397 GO:0003676(InterPro)
Eupl14g01315 119 PANTHER OS05G0353850 PROTEIN 2 91 IPR053151 -
Eupl14g01315 119 SUPERFAMILY Ribonuclease H-like 1 100 IPR012337 -
Eupl14g01315 119 Pfam Reverse transcriptase-like 5 84 IPR002156 GO:0003676(InterPro)|GO:0004523(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01315 - -