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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01319 ATGCGGCTGATAGGTAATCTAAAGAAATTAAATTTAGTGGTGCTAATTGACTCAGGTAGCACCCATAATTTCTTTGACCCGACAATAGCCAAGAAGGCTGGTCTATCCATTCTCTTTAGTGGATGGTTTGAAGTAATGTTTGTAAATGGGGAAAGATTAGCAGGACAAGGGAGGTGTAATGGAATCATATTGTCGCTCCAGAACCAACCAATCACTACTGATTTTTATTTACTGACATTGGGTGGACGTGATGTTGTCTTAGGGGCCCATTGGTTGAGGACATTGGGACCTATTTTGTGGAATTTTTCTAATCTTTCCATGCAGTTCAAAATAAACGGAGAGCCATGCAAAATTAACGGTGAAACTTCATCAAATTTGGCCATCATTGATGAGAATGATCTAAAGAGAACCATCAAGACTGACAAAAGGGGCGTTCTGCTACAATGTTTTAGCATTACCGAAGTTCAACCTAAATCTCAATTAGAGCCACAAATACAAAGGCTATAG 507 39.25 MRLIGNLKKLNLVVLIDSGSTHNFFDPTIAKKAGLSILFSGWFEVMFVNGERLAGQGRCNGIILSLQNQPITTDFYLLTLGGRDVVLGAHWLRTLGPILWNFSNLSMQFKINGEPCKINGETSSNLAIIDENDLKRTIKTDKRGVLLQCFSITEVQPKSQLEPQIQRL 168
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01319 168 Gene3D Acid Proteases 5 123 IPR021109 -
Eupl14g01319 168 SUPERFAMILY Acid proteases 11 99 IPR021109 -
Eupl14g01319 168 CDD retropepsin-like 3 93 - -
Eupl14g01319 168 Pfam Retroviral aspartyl protease 12 93 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01319 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:30387592 Eupl7g00523 Eupl-Chr7:13699157 dispersed