Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01345 | ATGGAGGAACAAGCCTCTAGCCTTACAACTGCTGCTCCTAGGAAGGTGAGATTTAAACCGAAAGTTCCTACTCACAAAACACCCAAATCTGCTGAAAACAAAATTGAAGGGCTTGAGGATACAGAAGCTGCTCAGACCAGGGAGTTGCTGCGGCATGTCAATGAAGGTTCTGGGAGGCGAGGACCTAAAGTTGAAAGGAAATCGGCACCAGTGCAAGTTGCATTTGGTCATGGAGGTGGATCGAGTTTCATAAGGTCATTTGGCAGGACTAGTAATTCCCGGAGTGGATCCGGACCTCAAAGTCCTGTATTTGATGATGGCCCCAATGCATCAGATGAGAAGAAGAAGAAAGAATATGTTGAACCCTGGGATTACTACAGTTACTATCCTGTTACCCTTCCTCTAAGGAGGCCGTACTCAGGAAACCCAGAACTTCTTGATGAGAAGGAATTTGGGGAAGCTTCGGCGAACTTGGATTACGATGAGAGTTATATAAATCCAGCCGCAGAGCTCGGTCTAATGGAGGAAAGTGAAGAAGCAAGGATGTTCTTTCTTCAGCTACCTGCTTCTCTACCTTTAGTTAAGCGATCAGCTAGTGTGAAGGGGAAAGAGAAAGTTGACAGCTTGAAACCATCCAGGGATATGCGTCCTCCAGAGAAGGGATGCAGCTTGGAAGAGTTGCCTGCGGGCTTGATGGGCAAAATGATGGTGTACAGGAGTGGTGCTATCAAGTTGAAGCTTGGAGAAACCCTTTATGATGTTTCCCCTGGTTCAGATTGTGTATTTGCCCAGGATGTTGCAGCAATCAATACAGAAGACAAACACTGTTGCATCCTTGGGGAGCTCAACAAGCGCGCCATCGTAACCCCGGATGTCGATTCCCTCGTAAATAGTGTGATTGACTTGGGTTAA | 912 | 46.82 | MEEQASSLTTAAPRKVRFKPKVPTHKTPKSAENKIEGLEDTEAAQTRELLRHVNEGSGRRGPKVERKSAPVQVAFGHGGGSSFIRSFGRTSNSRSGSGPQSPVFDDGPNASDEKKKKEYVEPWDYYSYYPVTLPLRRPYSGNPELLDEKEFGEASANLDYDESYINPAAELGLMEESEEARMFFLQLPASLPLVKRSASVKGKEKVDSLKPSRDMRPPEKGCSLEELPAGLMGKMMVYRSGAIKLKLGETLYDVSPGSDCVFAQDVAAINTEDKHCCILGELNKRAIVTPDVDSLVNSVIDLG | 303 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01345 | 303 | MobiDBLite | consensus disorder prediction | 84 | 104 | - | - | |
| Eupl14g01345 | 303 | MobiDBLite | consensus disorder prediction | 1 | 115 | - | - | |
| Eupl14g01345 | 303 | Pfam | RNA polymerase III RPC4 | 180 | 292 | IPR007811 | GO:0003677(InterPro)|GO:0005666(InterPro)|GO:0006383(InterPro) | |
| Eupl14g01345 | 303 | MobiDBLite | consensus disorder prediction | 25 | 66 | - | - | |
| Eupl14g01345 | 303 | PANTHER | DNA-DIRECTED RNA POLYMERASE III | 2 | 300 | IPR007811 | GO:0003677(InterPro)|GO:0005666(PANTHER)|GO:0005666(InterPro)|GO:0006383(InterPro)|GO:0042797(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01345 | K03026 | DNA-directed RNA polymerase III subunit RPC4 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:31394554 | Eupl9g00563 | Eupl-Chr9:13818556 | dispersed | |
| Eupl | Eupl-Chr14:17120820 | Eupl14g01345 | Eupl-Chr14:31394554 | wgd |