Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00003 | ATGCAACGACTCAGATCGAAAATTGTCTCGTGGCCATTGGGGTTAGGGAGATTGAATTTTTATTCGGTTAATGCTTGTGGGTTCGAACTCAATCACGAAAGTAGTTTTGCTTTTTCTTCTGGAAGTAGCAATGCCCAAGATTTAATTAGTGATGATTCGGACAGGTCCCAGTCGAAGACATATGCAACTTCTTGTGCTAAGTTGTTGGAAGATCCACCGAAAGATAGTCCAGTTTCCGATATGTTAGTTGATTCGTTCGGAAGGCTGCACACTTACTTGAGGATCTCCTTGACAGAGCGTTGCAATCTCCGGTGCCAGTACTGTATGCCTGCTGAGGGTGTGGAGCTCACTCCTAGTCCTCAACTTCTGTCACAGAATGAGATTGTTCGCTTGGCAAATCTCTTTGTCAGCTCTGGGGTGGATAAGATTCGATTGACTGGCGGGGAGCCAACCACTAGGAAAGATATTGAAGATATATGCTTACAGTTGTCTAACTTGAAAGGGCTGAAAACATTGGCAATGACTACAAATGGAATTACTCTTGCAAGAAAGCTTCCAAAGTTGAAAGAATGTGGGCTGAATTTGGTGAATATTAGTTTAGACACATTGGTAGCAGCAAAGTTTGAGTTTATGACAAGGCGTAAAGGGCACGGAAGGGTTATGGAGTCGATTAATACTGCTATAGACCTTGGATACAATCCTGTTAAAGTGAATTGTGTTGTAATGCGTGGGTTCAATGATGATGAGATCTGTGATTTCGTAGAATTAACACGTGAGAAACCAATCAATGTTCGGTTCATTGAGTTCATGCCTTTTGATGGAAATGTATGGAATGTCAAGAAACTTGTACCCTATTCGGAAATGATGGATAGAGTGGTACAAAGGTTTAAGGGCCTAAAGAGACTTCAGGATCACCCCACAGATACAGCCAAGAATTTCAGGGTAGATGGGCATTATGGTACTGTTTCTTTTATCACATCGATGACTGAGCATTTTTGTGCTGGTTGCAATAGATTGCGACTTTTAGCTGACGGGAACTTCAAAGTATGTCTCTTTGGTCCTTCAGAGGTTAGCTTAAGAGATCCCCTTCGTAATGGTGTTGATGATCAGGGGCTGAAGGAAATAATTGAAGCAGCGGTCAAGAGGAAGAAAGCTGCTCATGCTGGAATGTTTGACATTGCAAAGACGACAAATAGACCTATGATACATATTGGTGGCTGA | 1221 | 42.18 | MQRLRSKIVSWPLGLGRLNFYSVNACGFELNHESSFAFSSGSSNAQDLISDDSDRSQSKTYATSCAKLLEDPPKDSPVSDMLVDSFGRLHTYLRISLTERCNLRCQYCMPAEGVELTPSPQLLSQNEIVRLANLFVSSGVDKIRLTGGEPTTRKDIEDICLQLSNLKGLKTLAMTTNGITLARKLPKLKECGLNLVNISLDTLVAAKFEFMTRRKGHGRVMESINTAIDLGYNPVKVNCVVMRGFNDDEICDFVELTREKPINVRFIEFMPFDGNVWNVKKLVPYSEMMDRVVQRFKGLKRLQDHPTDTAKNFRVDGHYGTVSFITSMTEHFCAGCNRLRLLADGNFKVCLFGPSEVSLRDPLRNGVDDQGLKEIIEAAVKRKKAAHAGMFDIAKTTNRPMIHIGG | 406 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00003 | 406 | CDD | Radical-SAM | 95 | 295 | - | - | |
| Eupl1g00003 | 406 | Gene3D | Aldolase class I | 79 | 406 | IPR013785 | - | |
| Eupl1g00003 | 406 | SUPERFAMILY | Radical SAM enzymes | 82 | 368 | - | - | |
| Eupl1g00003 | 406 | ProSitePatterns | moaA - nifB - pqqE family signature. | 97 | 108 | IPR000385 | GO:0003824(InterPro)|GO:0046872(InterPro)|GO:0051539(InterPro) | |
| Eupl1g00003 | 406 | SMART | MiaB | 91 | 294 | IPR006638 | GO:0003824(InterPro)|GO:0051536(InterPro) | |
| Eupl1g00003 | 406 | SFLD | dehydrogenase like | 79 | 406 | - | - | |
| Eupl1g00003 | 406 | CDD | Twitch-MoaA | 328 | 397 | IPR010505 | GO:0006777(InterPro)|GO:0051539(InterPro) | |
| Eupl1g00003 | 406 | Hamap | GTP 3',8-cyclase [moaA]. | 82 | 406 | IPR013483 | GO:0006777(InterPro)|GO:0046872(InterPro) | |
| Eupl1g00003 | 406 | PANTHER | MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A | 57 | 406 | IPR050105 | GO:0006777(PANTHER)|GO:0061798(PANTHER)|GO:0061799(PANTHER) | |
| Eupl1g00003 | 406 | Pfam | Molybdenum Cofactor Synthesis C | 262 | 388 | IPR010505 | GO:0006777(InterPro)|GO:0051539(InterPro) | |
| Eupl1g00003 | 406 | Pfam | Radical SAM superfamily | 95 | 256 | IPR007197 | GO:0003824(InterPro)|GO:0051536(InterPro) | |
| Eupl1g00003 | 406 | ProSiteProfiles | Radical SAM core domain profile. | 85 | 308 | IPR007197 | GO:0003824(InterPro)|GO:0051536(InterPro) | |
| Eupl1g00003 | 406 | FunFam | molybdenum cofactor biosynthesis protein 1 | 79 | 405 | - | - | |
| Eupl1g00003 | 406 | Pfam | 4Fe-4S single cluster domain | 99 | 210 | - | - | |
| Eupl1g00003 | 406 | NCBIfam | GTP 3',8-cyclase MoaA | 82 | 406 | IPR013483 | GO:0006777(InterPro)|GO:0046872(InterPro) | |
| Eupl1g00003 | 406 | SFLD | cyclic pyranopterin phosphate synthase (MoaA-like) | 79 | 406 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00003 | K03639 | GTP 3',8-cyclase [EC:4.1.99.22] |