AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00004 ATGGAGATGTTTTGGTATTTTCATCCTTTCTTGGTGCTCATTGCGACTAATCCTCGTCGTAGAAGAGCTAATGTGGTATCTAAAGAAGAAAGTGCTGATGAAGAACCGCTGGTTCAACGGACTCAATCACAAGTCAAACGGGGTGGTCGACTCAGTGGGTCACAACACTCTGAGCGGGGTGAATCATCCAGAGCACCTAGGAGAGCTTGGGGTCGTGCCCGTCATAGCGATATTCCTTCGGTGAGTGCTCCTATCTCCCCGTTCATTTCCAATTCCGCTAAAGATTGCTTTGAGCATTTCTCTGGTCGAAAATTCACTAATGAGAGAGTAGTTGAGTTTAGCACTATTTTGGGTACTATGGTCCATTCATTGTTTGTATCTCGCGAGTGGGTTCCTATCACTCACTTGACCATTCCATTTTACCCTGTCCTGGTTAAACTTTTTTATGCCAACATGCACGCCATTCAGTGTGATGACCCGAGTGAGCTTTCCTTCCAGACTTTTGTCTCTGGGGCTTACCTAACTATTACACCTGATCTTATCTCTACCTTATTGGACATACCTCGTTCGTCTACCTCATATGAGTATATTCCTAGGACTCGTGAGATGACGACTTCTAGGGTCACCTTGACCGAGACTCTCACAGGACAAATATTTGACTGGAATACCTTCATACCTCTTACATCTCCTCTCCCTGAGTATCGTCTATTGCACCTCATCTGTAGGTACAACATTGATCCACCTGGCCATGGGGCACAGGTGAACATTGATTGTCTTCAGCTTATTTACCATCTAGGCACTAGATTTGTTTTTGACCTTCTGAGGTTCATTTTTAGAGCCATGGTTAGAGCGGGTAGCCAGTTGGCTAACCATCCTTGTCTCCCATTCCATCTATTGGTGAGCTCTATCTTACTTCATCTGGATGTGGCGATTCGAGCCAATGAGGAGGTGTGCTCTCCCATGGGGCCTATTGGGCCTTCGCTATTAGGAAGAGCATGTCTCAAGTTCGGAGAGTGA 1017 45.92 MEMFWYFHPFLVLIATNPRRRRANVVSKEESADEEPLVQRTQSQVKRGGRLSGSQHSERGESSRAPRRAWGRARHSDIPSVSAPISPFISNSAKDCFEHFSGRKFTNERVVEFSTILGTMVHSLFVSREWVPITHLTIPFYPVLVKLFYANMHAIQCDDPSELSFQTFVSGAYLTITPDLISTLLDIPRSSTSYEYIPRTREMTTSRVTLTETLTGQIFDWNTFIPLTSPLPEYRLLHLICRYNIDPPGHGAQVNIDCLQLIYHLGTRFVFDLLRFIFRAMVRAGSQLANHPCLPFHLLVSSILLHLDVAIRANEEVCSPMGPIGPSLLGRACLKFGE 338
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00004 338 MobiDBLite consensus disorder prediction 60 74 - -
Eupl1g00004 338 MobiDBLite consensus disorder prediction 37 59 - -
Eupl1g00004 338 Pfam Putative plant transposon protein 128 307 IPR046796 -
Eupl1g00004 338 MobiDBLite consensus disorder prediction 25 76 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00004 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2194573 Eupl Eupl11g01577 Eupl-Chr11:28215600 Eupl1g00004 Eupl-Chr1:249615
2197772 Eupl Eupl1g00004 Eupl-Chr1:249615 Eupl4g01881 Eupl-Chr4:42643992
2210408 Eupl Eupl1g00004 Eupl-Chr1:249615 Eupl12g00242 Eupl-Chr12:9877436