AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00006 ATGGAGGAGGCATCTGGTTCATTAAATGAAATTGTTCCAACAGCTATATCAGTTGATGTAACTGAACGATTTACAACAGACATGGTTTTCAAAAGTCGGAATGAACTAATGCAGTGGACTAGAGAAGTTGGAAAAGAAGTTGGGATTGTCGTTGTGACTAAAAGATCAGACTATAGTGTAAATGGAAGGACCCCTAGACTTACATTTGGTTATGAGAGGGGTGACCAATATAGAGAGAAGCAATCTGGCAGAAAAGTACAAAATATTATAAATACGGTTAACGAGCACAAGTACATTGAATTCCATAGGAGGCACCCAAATACAGATGTAGTTATGGATTTGTTTTGGGCTCATTCGGAGTCTATTGAGATTGGGAAGTGTTTCCACATTGTTTTTTTTATGGACAGTACATTTAAGACAAACAGATATAGGATGCCTTTGTTAGAGATTGTCGGAGTGATATCCACAGAGAAGATATTCACTTTTGCTATTGTTTACATGGAGGCTAAAAAAGAAGACAATTTTGTATGGACATTGAAATGCATGAAGTCAACACTTGGTCCGAATCACACTGATATAAAGGAATCAATACAGAAAAGCATAAACACGATGATGCATCAGTTCAGACCAGCTTTATATAAGAATCTGAGGAGAATTGTTTCTAGGTCTGCACTTGAGATGGTGCTTCAGGAGGAAAACAGAACTGAGTCAATTGGTATAGATTCTCATGTATGTGGTTGTGACCTTCGTCGTACACATGGGTTGCCTTGTGCGCATGAGATTGTTTATTATAAGCGAGAAGGTCAGCCCATACCTCCATCGTATGTCCATCCACATTGGAGGAAGCTCTCTACTATACCCAGTGTTAGCCCAGTGGACGACTTAGACTATATGTCAGAGTTTGAGTTATTTAGACAGAGATTCGAAAATTCAAGTGAAGATATTTTTTTTCAAACCTACATTACACAAGTGAAAGATGTTAGAGATGGACATTGTGGATTTAGAGTGGTAGCCGACCACATAGGGTTCGATGAGGCCGGATGGGCACAGGTCAGACAAGATTTAAAATATGAGTTGTCATTTCGCATCGAGTACTATGACATTGTATTGTACGAGGTTGGTAGAGCTGTTGCCCTTATACAAGTGTTGGAATTTCAAGGTCCTAATGCAAATAAAGATCATTGGATGATTATGCTAGACATGGGCCATCTTATAGCTTCATGA 1224 38.89 MEEASGSLNEIVPTAISVDVTERFTTDMVFKSRNELMQWTREVGKEVGIVVVTKRSDYSVNGRTPRLTFGYERGDQYREKQSGRKVQNIINTVNEHKYIEFHRRHPNTDVVMDLFWAHSESIEIGKCFHIVFFMDSTFKTNRYRMPLLEIVGVISTEKIFTFAIVYMEAKKEDNFVWTLKCMKSTLGPNHTDIKESIQKSINTMMHQFRPALYKNLRRIVSRSALEMVLQEENRTESIGIDSHVCGCDLRRTHGLPCAHEIVYYKREGQPIPPSYVHPHWRKLSTIPSVSPVDDLDYMSEFELFRQRFENSSEDIFFQTYITQVKDVRDGHCGFRVVADHIGFDEAGWAQVRQDLKYELSFRIEYYDIVLYEVGRAVALIQVLEFQGPNANKDHWMIMLDMGHLIAS 407
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00006 407 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 108 207 IPR031052 GO:0006355(InterPro)
Eupl1g00006 407 Pfam MULE transposase domain 131 186 IPR018289 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00006 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197774 Eupl Eupl1g00006 Eupl-Chr1:508600 Eupl3g00196 Eupl-Chr3:6150185
2210410 Eupl Eupl1g00006 Eupl-Chr1:508600 Eupl2g01244 Eupl-Chr2:26566771