AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00007 ATGATAGAGGACGGAGAAGAGCTCGACCTCTCGAACTCGATCTTAATTGGCCACAACCTTTCTCACGGTTGGGTTTCTCTCCTTTTGGGTGGGGTAATGTGGGTGCCCAGCAATATGGGGTGCCCAAAGATGGGCCCCTCAAATAGGCGTGAGTGCACGTCAAATGTTGGTGCCAAGGTGGGCGCCCGTAGATCGACCCTTTCCCAAAATATAGAAATAGATGTCAAATTGCCATTTCTTTCTTGTAAGCTCCCATCCTACTGTCCTGCTTTTCTCCGTAAAATGGCGCTTATCTTCCGTCCATCTTCCCCCACCTTAACTCCCTCTCGCCTCAACAACGAACTCAACTCTTCCTCGAACCTAAATTACAATTTCAAGCTCTTACAATACAGAGCCCCATGGAAAAGAATCTCACCTTTAACCCCCAAAAGCTCCACAATTCCGAAATACTACCGACCCAAATCCCGCAATTTCACCTGCAGAGGTAGCATGAGCATGAACCCTAATATCGAAAACACGATTGATTTTGAAATGGGGCAGTCGGGAGATGAAGGCTTAGGGTCTCCGTGGGTGGGGGCAGTCGTTTTCATGAGAAACCCTTCGGTCTCGCACGTGGAGTACTGCACAACCCTCGAAAGATTAGGGTTGGGGAAGCTCTCGACGGAGGTCTCGAAGTCTAGGGCTTCAGAGATGGGGTTACGGGTCACGAAGGCCGTCAAGGATTATCCGCTGGGGACGCCCGTTCAGATCTCCATAGATGTCACCAGGAAGAAGCAAAGGTTGAGGCTCGACGGGATCATCAGAACTGTACTTACTCTCGGCTGCAATAGGTGTGGTGAACCAACTGCCAAGTCCGTCTTCTCAAACTTCACACTTTTACTAACTGAAGAACCCATTGAAGAGTCGGACGTGATTAATATGGGGGTCATCTTTGGAGACCACAAATCCAAAACATCGGCTGGAACTAGTGGGGACGAGGAAAATGATGAAGCTACGATCGACTTGGATGATCAGCTCTACTTTCCTGCTGAAGAAAAAGAAAAAGATATTTCGAAGCACATTCGGGACATGGTGCATGTGGAGATCACCATTGATGCTATATGCGATTCAAGATGCAAAGGTTTATGTCTCAGATGTGGAACAAATCTGAACACTACTAGTTGTAATTGTTGCAAACACGAGGTGAAGGAGAAAAGCTATGGTCCTCTTGGAAATTTAAGAAATCAAATGCAGCCAAAATGTAGTTAG 1248 47.28 MIEDGEELDLSNSILIGHNLSHGWVSLLLGGVMWVPSNMGCPKMGPSNRRECTSNVGAKVGARRSTLSQNIEIDVKLPFLSCKLPSYCPAFLRKMALIFRPSSPTLTPSRLNNELNSSSNLNYNFKLLQYRAPWKRISPLTPKSSTIPKYYRPKSRNFTCRGSMSMNPNIENTIDFEMGQSGDEGLGSPWVGAVVFMRNPSVSHVEYCTTLERLGLGKLSTEVSKSRASEMGLRVTKAVKDYPLGTPVQISIDVTRKKQRLRLDGIIRTVLTLGCNRCGEPTAKSVFSNFTLLLTEEPIEESDVINMGVIFGDHKSKTSAGTSGDEENDEATIDLDDQLYFPAEEKEKDISKHIRDMVHVEITIDAICDSRCKGLCLRCGTNLNTTSCNCCKHEVKEKSYGPLGNLRNQMQPKCS 415
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00007 415 PANTHER LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 1, CHLOROPLASTIC 155 413 - -
Eupl1g00007 415 Pfam Large ribosomal RNA subunit accumulation protein YceD 263 406 IPR003772 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00007 K07040 DUF177 domain-containing protein