Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00011 | ATGTGGAAGCTTAAGATTGGCGATAGTGGTGGCCCTTATAGCCAATATCTTTTCAGCACCAACAATTTCGTTGGGAGACAGACTTGGGAGTTTGATCCCGACGCTGGAACACCCGAAGAGCGAGCTGAAGTTGAAAAGGCTCGCCAGGAGTTTCGCAAAAACCGGTTTCAAGTAAAGCCTTGCAGCGATGTTTTATTGCGATTGCAGATGTTGAAAGAGAATAAAGATAAATTCAACCTGAGTATACACCCAGTAAAGGTAGGAGACAACGAGGAAGTAACCTATGAGGCACTCACCACCACATTGAGGAGGGCCGTTCAATTCTTTTCGGCTATGCAGACAAGCGACGGGCATTGGGCCGCCGAAATTGGGGGCCCCTTGTTTTTCATGCCTCCCTTTGTCTTTGCGCTATACATTACTGGAACACTTGATATTATGCTATCGCCGGAACATAAAAAGGAGACTCTACGCTACATGTACTATCATCAGAATGAAGATGGAGGTTGGGGATTTCATATTGAGGGTCACAGCACCATGTTCGGTACGATACTTAACTACATTTGTATGCGTATGCTAGGAGAAGGGCCTGATGGTGGTGAAGACAATGCGTGTGCAAGAGGCCGAAATTGGATCCTTGATCATGGTGGTGCAACATCGATACCTTCTTGGGGAAAGACTTGGCTTTCGATACTTGGAGTGTATGAGTGGTCAGGATGCAACCCAATGCCCCCGGAGTTTTGGCTTTTTCCTTCCTTTCTCCCTATGCATCCAGCAAAGATGTGGTGTTATTGTCGCTCTGTTTACATGCCCATGTCATATTTATATGGGAAGCGATTTGTGGGCCCAATCACAGATCTCATTCTAGCGTTGAGAGAAGAGCTTTATGTTCAACCTTATCATGAAATAAATTGGAATAAAACACGACATTTGTGTGCAAAGGAGGATCTTTACTACCCCCATCCCCTGATACAAAATTTAATATGGGATTCTCTTCACTTGTTTACTGAGCCTCTTCTGACACGGTGGCCCTTATCCAAGTTTAGAGAGAGAGCTCTTCAAGTAACTATGAAGCACATTCATTATGAAGATGAAAATAGTCGATACATGACCCCCGGATCTGTTGAAAAGCCATTATTTATGCTTGCTTGTTGGTCGGAAGATCCAAATTCGGATGCATTCAAGAAACATCTGGCTAGGGTCCCAGATTACTTATGGGTTGCTGAAGATGGAATGAGAATGCAGAGTTTTGGTAGTCAGAATTGGGATACTGCTTTTTCCATTCAAGCACTCATCGCGAGTAATCTTACCGAAGAAATTGGACCTATTCTTAAGAAAGGACATGATTACATAAAAAAATCACAGGTTGAAGATAATCCATCTGGTGACTTTCAAAGCATGTACCGTCACATTTCTAAAGGGTCGTGGACTTTCTCAGATCAAGATCATGGGTGGCAAGTCTCCGATTGCACAGCAGAAGGACTAATGGTTTGTCTCTTGTTCTCACAAATGCCCCCTGAAATTGTTGGGGAAAAAATGGAACCAAAGCGGCTATATGATTCTGTGAACGTCATTCTTTCCCTACAAAGTGAAAATGGCGGTTTACCAGCCTGGGAGCCAGTAACAGGACATGACTGGTTGGAGGTGCTCAATCCTACAGAATTTTTTGAGGGCATTGTTATTGAACATGAATATGTTGAATGCACTGCATCGGCACTCCAAGCTTTAGTGTTTTTTCAGAAATTATATCCTGGTCATCGAAAGAAAGAAATAGAAAGTTTTATCATAAAAGCAGTGAATTACATTGAAGATAAACAAATGCCTGATGGATCGTGGTATGGTAATTGGGGAATTTGCTTCATCTATGGCACATGGTTTGCACTACGAGGGCTAGTAGCTGTTGGGAAGACCTTTAACAATAGCTTGACTGTCCGTAAAGCTTGTGAGTTTCTATTATCAGCACAACAATCTATTGGTGGTTGGGGAGAAAGTTATCTTTCATGCCCAGACAAGGTATTTAGACCTCTAGAAGGTAATCGATCAAATTTGGTACATACTGCATGGGCTATGTTGGGTCTTATTAATGCAGGGCAGGCTGAGAGAGATCCGACACCTTTGCATCGTGCAGCAAAGATACTAATTAATATGCAGATGGAAAATGGTGATTTTCCCCAACAGGAAATTACAGGAGTTTTCATGAAGAACTGTATGCTACACTATGCAGCATTTAGAAACATTTTCCCATTATGGGCTCTTGGAGAATATTGTCGACGGGTTCCATTGTCTTCTAAAAACCTTTAA | 2298 | 42.56 | MWKLKIGDSGGPYSQYLFSTNNFVGRQTWEFDPDAGTPEERAEVEKARQEFRKNRFQVKPCSDVLLRLQMLKENKDKFNLSIHPVKVGDNEEVTYEALTTTLRRAVQFFSAMQTSDGHWAAEIGGPLFFMPPFVFALYITGTLDIMLSPEHKKETLRYMYYHQNEDGGWGFHIEGHSTMFGTILNYICMRMLGEGPDGGEDNACARGRNWILDHGGATSIPSWGKTWLSILGVYEWSGCNPMPPEFWLFPSFLPMHPAKMWCYCRSVYMPMSYLYGKRFVGPITDLILALREELYVQPYHEINWNKTRHLCAKEDLYYPHPLIQNLIWDSLHLFTEPLLTRWPLSKFRERALQVTMKHIHYEDENSRYMTPGSVEKPLFMLACWSEDPNSDAFKKHLARVPDYLWVAEDGMRMQSFGSQNWDTAFSIQALIASNLTEEIGPILKKGHDYIKKSQVEDNPSGDFQSMYRHISKGSWTFSDQDHGWQVSDCTAEGLMVCLLFSQMPPEIVGEKMEPKRLYDSVNVILSLQSENGGLPAWEPVTGHDWLEVLNPTEFFEGIVIEHEYVECTASALQALVFFQKLYPGHRKKEIESFIIKAVNYIEDKQMPDGSWYGNWGICFIYGTWFALRGLVAVGKTFNNSLTVRKACEFLLSAQQSIGGWGESYLSCPDKVFRPLEGNRSNLVHTAWAMLGLINAGQAERDPTPLHRAAKILINMQMENGDFPQQEITGVFMKNCMLHYAAFRNIFPLWALGEYCRRVPLSSKNL | 765 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00011 | 765 | SUPERFAMILY | Terpenoid cyclases-Protein prenyltransferases | 341 | 759 | IPR008930 | - | |
| Eupl1g00011 | 765 | Pfam | Squalene-hopene cyclase N-terminal domain | 103 | 405 | IPR032697 | - | |
| Eupl1g00011 | 765 | PANTHER | TERPENE CYCLASE-MUTASE FAMILY MEMBER | 1 | 761 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Eupl1g00011 | 765 | Gene3D | - | 35 | 234 | - | - | |
| Eupl1g00011 | 765 | FunFam | Terpene cyclase-mutase family member | 392 | 761 | - | - | |
| Eupl1g00011 | 765 | ProSitePatterns | Terpene synthases signature. | 608 | 622 | IPR002365 | GO:0016866(InterPro) | |
| Eupl1g00011 | 765 | SFLD | Prenyltransferase Like 2 | 88 | 757 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Eupl1g00011 | 765 | CDD | SQCY-1 | 102 | 754 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Eupl1g00011 | 765 | Gene3D | - | 391 | 763 | - | - | |
| Eupl1g00011 | 765 | FunFam | Uncharacterized protein | 123 | 352 | - | - | |
| Eupl1g00011 | 765 | Pfam | Squalene-hopene cyclase C-terminal domain | 420 | 755 | IPR032696 | - | |
| Eupl1g00011 | 765 | NCBIfam | squalene-oxidosqualene cyclases | 101 | 754 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Eupl1g00011 | 765 | SUPERFAMILY | Terpenoid cyclases-Protein prenyltransferases | 125 | 413 | IPR008930 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00011 | K15813 | beta-amyrin synthase [EC:5.4.99.39] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2197777 | Eupl | Eupl1g00011 | Eupl-Chr1:665582 | Eupl1g00032 | Eupl-Chr1:1089608 |