AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00012 ATGAGGAAGCTTTTCTTCTTTAAATCTTCATCTAGCAACGGAAACAGCAACAATGTTCCTCCACCACCACCGACTGATGATGAGAAGGTTTATTGGGAGACTCCATGGGAAAGTGGAGTGAACAATCAAGTCGGCAACAAGGCCGAGAAGAGCTCCCAATGCTCGATTGACTTGTTTTCCAAAGCTCAAAAACAACATCCAGATAGCCAGAACTCTGCTCCAAGTTCAGGTCTTAGAAGGAGCCTCTCATTTTCATCAGCAGCGTTTCATAGTGGTGGCCTGGAAGAAAGGAATTGGATTTCTTCGTGTGATCCTAGTAGATCTCTCACTGCTACCAGCAACATTCCACCTCAGCCATCTGATTATGCAGTTCGTAGTTGTCGATCCCTTACTCCAGAGAGGCGCTCCAAGGCTAAAAGAGGGAAAGGGGCTGCTACTTGGAAGGCATATGGAGTAGAGAAGCTTGATTCTCCTGCTTCATCCAAAGCTTGCTATGATTCGTCAGGGAACTCCTCTTATAACTCTCCTCCAGTCCCACTCAAATGCGGGTCCGCACGCTTAACTCTTGTCTCGAACAAGATCCTGGATCTCTACATTGATGGGGAACAACAGGACAGGAACTTGAGGCCAACTAACAGTTCTTCTCTAAGAAACCCATCAGGTAATGGAAATGGCGTTGGTTGGCGGCCCCCACGAGTTCAATCTACTGCACCGGCTTCACCAACAGGTATTAGTAAAGAAAGACCAAGGTCTCATTCATTCAGAGAAATGAGAGATACCCAGCTTCGCGTTTCAACCAGAAATTGGACAACAAACGAATTTGGGCCCGATTCTCCACAAAAACTTGCAAAGAATGTGGTTGAGAGACTGTCCCAGGTATTTCCCCAGAAATCCACAACAAAATCCAGGGATTTTGACCCTGACACCCCAACCATGGTAGAAGATATCTTTGAGGACTACTTGGACCCACATCCCAGCACAAATTCAGATGGGGTCACCCAAAAAAGTTGTTTATCAGACGACCCTCACAGAAACATAAATGGATATTGTGGAGAGGAAATTTCATGCTTCCAGAAACAAAACAATTTTCTCAGAGATGTTCCAGTGAGTATGTATTCAGGTCAAACGGAGGAGGATGTAAATATAGAATTACATAGAAAAGCACGGGAAGCCAAGGAGAGGGTCATGCTTCTTTCAGAAGAGCTTGAGCAGGAGAACCTTCTTCAAGATAGCAGTTTCAGTATACCAGAATTGCTTCAGACAATTAAAAACCTCACTGTGGACAGAAGCAGCCTGGCTCTGGAGGTCTCGGCCCAATTACAGTGTCGAATTGCTGAGAGAGCGTCAACTAAAGAAGCACTTAGAGTGACAAAAGTGGAATTGGATTCACGAACATGGCGACTGGAGAAGGAGAAGAACGAGTTGCAGTCAGGATTGGAGAAGGAGTTGGACAGAAGGTCGAGCGACTGGTCACTCAAGCTCGAGAACTACCAGTCAGAAGAGCAGAGGCTACGTGATAGGGTAAGGGAGCTGGCAGAGCAGAATGTCTCACTTCAAAGAGAAGTCTCTTCCCTCAGTAGCAGGGAAGTGGAGAGCAGAAGCAGGATGACAAATTCAGAGCTACAACTGAAGGACCTGACTGAAAGGTTAGAAGAAGCAAGAGAGGAGAACCAGGATCTTAAGAAAACCCTGTTGGAGCTGCAAGAGCGGTTTAAAGGGGTGGAAGCAGATTTTGGTTGCATCCAAAGAAGCTATCTAGAGAAGGACAAGGAAAACAAGGAGTTGCATAAAACTGTTACAAGATTACAAAGGACATGCAGCGAACAAGAGAAGACAATTGCTGGGTTGCGACACGGGCTTAGTGAGGAAATCAGAAGGAAGGAATCCTCAGAGAAGTTTGATAATAACGTGGGTAAATTGCAAATGGAGCAAGTGAGGTTGACGGGGGTGGAGCAGATTTTGAGAAGGGACGTGGAATCTTATAGGCTTGAAGTTGAGTCCCTTCGGCATGAGAGCATTAATCTTTTGGACCGCCTGCGATGCAGCAGAAGCGAGGGTGGTTTTTCATCCTTTAAGCTCGATCAGGAGCTGCAGGCCCGGGTTAACTGCTTACAGAGTCAAGGGATGTTGTTGTTCGATGAGAGCAGCCGGCTATGTGCGCAGTTACTGGAATTTATTAAAGGGAAAACAGGTCAGATTCTTGAAATTGTACCAGGCGCTGAGCATTTTCAAGAGGTTAGCAAGAATGGATTAGATGGGTATTTTCTAGTGGAATCTGATATGAAAGTCCAGAGTTTCAAGAGGGGAATTGAAAATCTGACGAGAAGTTTGCAGACAATATCTTTGGTGTTGCATGAGAAGTCCAAATCAGTTTCTTCGGAATCTGAGTCACACTGCACTGATAATGGCGGATCAGGGAAACTAAATGGTCAGGCCTTAGAGAATGATATTGGATTCCAGCTCAAGGCAGAAACTCTACTAACAAGTGTCTTGAGAGAAAAGCTATTCTCAAAACAGCTGGAAGTTGAACAATTGCAAGCTGAGCTGGCAACTGCGGTAAGGGGTCACGACATCCTCAGATGTGAAGTCCAGGGTGCGCTAGATACCCTTTCATGTGTGTCCCACAAGATGAAGGATCTTGAACTTCAGATGTTGAGGAAGGATGAGAACATAAACCAGCTTAAGAGTGACCTGCAAGAATGTGCAAAGGAGTTGACAATCACTAAGGGGATACTGCCAAAAGTTTCTGAAGAGAGAGATGTGATGTGGGAGGAAGTGAAGCAATACAGTGAGAAGAACATGTTACTGAACTCCGAGGTGAACTTTTTGAGAAAGAAGATAGAGGCCCTCGACGAAGACTTACTTCTTAAAGAAGGCCAGATCACAATTTTGAAAGACAGTCTTGACAACAAACCATTTGACATCCTCTACAGTCCCAAGTCTATTCAAGAATTCATGCTGGAATGA 2967 45.2 MRKLFFFKSSSSNGNSNNVPPPPPTDDEKVYWETPWESGVNNQVGNKAEKSSQCSIDLFSKAQKQHPDSQNSAPSSGLRRSLSFSSAAFHSGGLEERNWISSCDPSRSLTATSNIPPQPSDYAVRSCRSLTPERRSKAKRGKGAATWKAYGVEKLDSPASSKACYDSSGNSSYNSPPVPLKCGSARLTLVSNKILDLYIDGEQQDRNLRPTNSSSLRNPSGNGNGVGWRPPRVQSTAPASPTGISKERPRSHSFREMRDTQLRVSTRNWTTNEFGPDSPQKLAKNVVERLSQVFPQKSTTKSRDFDPDTPTMVEDIFEDYLDPHPSTNSDGVTQKSCLSDDPHRNINGYCGEEISCFQKQNNFLRDVPVSMYSGQTEEDVNIELHRKAREAKERVMLLSEELEQENLLQDSSFSIPELLQTIKNLTVDRSSLALEVSAQLQCRIAERASTKEALRVTKVELDSRTWRLEKEKNELQSGLEKELDRRSSDWSLKLENYQSEEQRLRDRVRELAEQNVSLQREVSSLSSREVESRSRMTNSELQLKDLTERLEEAREENQDLKKTLLELQERFKGVEADFGCIQRSYLEKDKENKELHKTVTRLQRTCSEQEKTIAGLRHGLSEEIRRKESSEKFDNNVGKLQMEQVRLTGVEQILRRDVESYRLEVESLRHESINLLDRLRCSRSEGGFSSFKLDQELQARVNCLQSQGMLLFDESSRLCAQLLEFIKGKTGQILEIVPGAEHFQEVSKNGLDGYFLVESDMKVQSFKRGIENLTRSLQTISLVLHEKSKSVSSESESHCTDNGGSGKLNGQALENDIGFQLKAETLLTSVLREKLFSKQLEVEQLQAELATAVRGHDILRCEVQGALDTLSCVSHKMKDLELQMLRKDENINQLKSDLQECAKELTITKGILPKVSEERDVMWEEVKQYSEKNMLLNSEVNFLRKKIEALDEDLLLKEGQITILKDSLDNKPFDILYSPKSIQEFMLE 988
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00012 988 Coils Coil 926 953 - -
Eupl1g00012 988 Gene3D - 459 637 - -
Eupl1g00012 988 Coils Coil 877 904 - -
Eupl1g00012 988 Coils Coil 494 528 - -
Eupl1g00012 988 MobiDBLite consensus disorder prediction 1 16 - -
Eupl1g00012 988 Coils Coil 536 577 - -
Eupl1g00012 988 PANTHER CAP-GLY DOMAIN LINKER 1 983 - -
Eupl1g00012 988 MobiDBLite consensus disorder prediction 1 30 - -
Eupl1g00012 988 Coils Coil 651 671 - -
Eupl1g00012 988 MobiDBLite consensus disorder prediction 59 79 - -
Eupl1g00012 988 Coils Coil 381 408 - -
Eupl1g00012 988 MobiDBLite consensus disorder prediction 205 261 - -
Eupl1g00012 988 MobiDBLite consensus disorder prediction 110 145 - -
Eupl1g00012 988 MobiDBLite consensus disorder prediction 205 222 - -
Eupl1g00012 988 Coils Coil 592 612 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00012 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2214711 Eupl Eupl1g00012 Eupl-Chr1:739530 Eupl5g00030 Eupl-Chr5:592829