Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00013 | ATGGCCTCAGTGGAGGGAGAGAGCTCACCAGCTACTCTTGCATTTATGGAGCTTGCTATGCAGCAGGCAAAGCTTGCCTTAGACAGCCTTGAAGTGCCAATTGGCTGTGTGATTGTCGAGGATGGAAAGGTCATTGCCTCAGGGAGAAACCGAACTACAGAGACACGAAATGCTACAAGACATGCGGAGATGGAGGCCATTGATGTTCTGCTTGAACAGTGGCAAAAGATTGGACTTTCGGAGACAGAAGTCGCAGGAAAATTTTCAAGATGCAATCTTTATGTTACATGTGAACCATGTATAATGTGTGCAGCAGCCTTATCGATTCTTGGAATAAAGTCCGTATATTATGGCTGTGCTAATGATAAATTTGGAGGGTGTGGATCAATCTTGTCATTACATTCAAGTAGCTCTGAACAGCTTAATAGTGGTGGGGTTTCACAAGGGACGGGTTTCAAATGTACTGGAGGAATAATGGCATCAGAAGCTGTTTCTCTGTTACGAAGTTTCTATGAACAAGGAAACCCCAACGCTCCAAAGCCTCATAGGCCGGTTCAGGTATCACCATGA | 570 | 44.91 | MASVEGESSPATLAFMELAMQQAKLALDSLEVPIGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKIGLSETEVAGKFSRCNLYVTCEPCIMCAAALSILGIKSVYYGCANDKFGGCGSILSLHSSSSEQLNSGGVSQGTGFKCTGGIMASEAVSLLRSFYEQGNPNAPKPHRPVQVSP | 189 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00013 | 189 | Gene3D | Cytidine Deaminase, domain 2 | 8 | 184 | - | - | |
| Eupl1g00013 | 189 | ProSiteProfiles | Cytidine and deoxycytidylate deaminases domain profile. | 10 | 138 | IPR002125 | - | |
| Eupl1g00013 | 189 | Pfam | MafB19-like deaminase | 14 | 132 | IPR028883 | GO:0002100(InterPro)|GO:0008251(InterPro) | |
| Eupl1g00013 | 189 | FunFam | tRNA-specific adenosine deaminase 2 | 8 | 184 | - | - | |
| Eupl1g00013 | 189 | CDD | nucleoside-deaminase | 16 | 128 | - | - | |
| Eupl1g00013 | 189 | ProSitePatterns | Cytidine and deoxycytidylate deaminases zinc-binding region signature. | 61 | 107 | IPR016192 | GO:0008270(InterPro)|GO:0016787(InterPro) | |
| Eupl1g00013 | 189 | PANTHER | CYTOSINE DEAMINASE FAMILY MEMBER | 5 | 177 | - | GO:0002100(PANTHER)|GO:0052717(PANTHER) | |
| Eupl1g00013 | 189 | SUPERFAMILY | Cytidine deaminase-like | 12 | 176 | IPR016193 | GO:0003824(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00013 | K15441 | tRNA-specific adenosine deaminase 2 [EC:3.5.4.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2197778 | Eupl | Eupl1g00013 | Eupl-Chr1:746580 | Eupl4g01466 | Eupl-Chr4:23839114 |