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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00016 CTTAGCACTGTTAGTTTATCTGGAGTTTTGAATTTCGTTGATGGGCTTTGGTCTTCTTGTGGAGTAGAGAGATTGATAATCTTTAAGGCCAATCACAAGGAGAAGCTTGATCAAGCGTTCCTAAGACAAGGTCGGATGGACAAGCACATCAACCTTTCATACTGTGGATTCACAATGTTTAAGATTCTAGCGACTACCCATCTCAACATCGACCAACCTCTTGAAGGAGGTAGAGGAGATGTTGCCTTTGGTTAA 255 41.96 LSTVSLSGVLNFVDGLWSSCGVERLIIFKANHKEKLDQAFLRQGRMDKHINLSYCGFTMFKILATTHLNIDQPLEGGRGDVAFG 84
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00016 84 Gene3D - 1 54 IPR027417 -
Eupl1g00016 84 PANTHER BCS1 AAA-TYPE ATPASE 4 74 IPR050747 -
Eupl1g00016 84 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 61 IPR027417 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00016 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197780 Eupl Eupl1g00016 Eupl-Chr1:788597 Eupl9g00989 Eupl-Chr9:20113111
2210411 Eupl Eupl1g00016 Eupl-Chr1:788597 Eupl13g00297 Eupl-Chr13:4008023