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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00020 ATGCAAGGTGGGCTTCATGCACTAATTGATGGTCCTGACATCTTAGATCTCCTAGAGGACGAGAATCAGCCAAAGTGGATGTTTCTTAGTGTTTTAAAACCTGGATGGGACTGGCTGGTTAAGTGGCAAACCCAAAACAATCCAGTGTTGTCAAAGCTTCGCCTACCCGGGACCCTAGTGCTTAAAACATGTCCTAGACAGCTCCAAGATACTGAGACAACTTCAGGAGAAACAGAAGTGAAATTTCAGGTGTCTAGAGATACGTTGGGTGCCATGCTGAGATCAATGGCCTATATTCGCGAGCAGCTCTCAAACACTGCTGAGCCCCAATCAGATCCATCTTCAAAGAGGCTACGACAGTAG 363 46.56 MQGGLHALIDGPDILDLLEDENQPKWMFLSVLKPGWDWLVKWQTQNNPVLSKLRLPGTLVLKTCPRQLQDTETTSGETEVKFQVSRDTLGAMLRSMAYIREQLSNTAEPQSDPSSKRLRQ 120
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00020 120 PANTHER COMM DOMAIN-CONTAINING PROTEIN 9 68 110 IPR037360 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00020 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197783 Eupl Eupl1g00020 Eupl-Chr1:875698 Eupl7g00802 Eupl-Chr7:24762680
2214714 Eupl Eupl1g00020 Eupl-Chr1:875698 Eupl5g00034 Eupl-Chr5:705533